WormBase Tree Display for Gene: WBGene00013939
expand all nodes | collapse all nodes | view schema
| WBGene00013939 | SMap | S_parent | Sequence | ZK218 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | ZK218.5 | |||||||
| Molecular_name | ZK218.5 | ||||||||
| ZK218.5.1 | |||||||||
| CE16705 | |||||||||
| Other_name | CELE_ZK218.5 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | ZK218.5 | ||||||||
| DB_info | Database | AceView | gene | 5R581 | |||||
| WormQTL | gene | WBGene00013939 | |||||||
| WormFlux | gene | WBGene00013939 | |||||||
| NDB | locus_tag | CELE_ZK218.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013939|UniProtKB=O46000 | |||||||
| family | PTHR21724 | ||||||||
| NCBI | gene | 191245 | |||||||
| RefSeq | protein | NM_074932.3 | |||||||
| TREEFAM | TREEFAM_ID | TF317956 | |||||||
| TrEMBL | UniProtAcc | O46000 | |||||||
| UniProt_GCRP | UniProtAcc | O46000 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (78) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (11) | |||||||||
| Paralog (63) | |||||||||
| Structured_description | Automated_description | Enriched in g1AL; g1AR; and g1P based on single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and sir-2.1 based on microarray; tiling array; and RNA-seq studies. Is affected by six chemicals including Zidovudine; Tunicamycin; and paraquat based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: ShK domain-like and ShKT domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK218.5 | |||||||
| Corresponding_transcript | ZK218.5.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00059283 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00038232 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026422 | ||||||||
| Expr1162712 | |||||||||
| Expr2008793 | |||||||||
| Expr2027027 | |||||||||
| Drives_construct | WBCnstr00029427 | ||||||||
| Construct_product | WBCnstr00029427 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (113) | |||||||||
| Interaction | WBInteraction000133716 | ||||||||
| WBInteraction000346906 | |||||||||
| WBInteraction000367706 | |||||||||
| WBInteraction000395886 | |||||||||
| WBInteraction000396462 | |||||||||
| WBInteraction000410492 | |||||||||
| WBInteraction000431285 | |||||||||
| WBInteraction000450881 | |||||||||
| WBInteraction000451618 | |||||||||
| Map_info | Positive | Positive_clone | ZK218 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 12.7886 | |||||||
| Reference | WBPaper00061876 | ||||||||
| Method | Gene |
