WormBase Tree Display for Gene: WBGene00013836

WBGene00013836 SMap: S_parent: Sequence: ZC47
  Identity: Version: 2
    Name: CGC_name: fbxa-29 Person_evidence: WBPerson655
      Sequence_name: ZC47.3
      Molecular_name: ZC47.3
        ZC47.3.1
        CE14998
        ZC47.3.2
      Other_name: CELE_ZC47.3 Accession_evidence: NDB BX284603
      Public_name: fbxa-29
    DB_info: Database: WormQTL gene WBGene00013836
        WormFlux gene WBGene00013836
        NDB locus_tag CELE_ZC47.3
        Panther gene CAEEL|WormBase=WBGene00013836|UniProtKB=A4F331
          family PTHR23015
        NCBI gene 191056
        RefSeq protein NM_001027805.3
        TREEFAM TREEFAM_ID TF322006
        TrEMBL UniProtAcc A4F331
        UniProt_GCRP UniProtAcc A4F331
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:55 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 12 Dec 2005 15:18:56 WBPerson2970 Name_change: CGC_name: fbxa-29
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxa
    Allele (97)
    RNASeq_FPKM (74)
    Ortholog (22)
    Paralog (225)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in intestine; rect_D; rect_VL; and rect_VR based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and eat-2 based on RNA-seq; tiling array; and microarray studies. Is affected by seven chemicals including methylmercuric chloride; rotenone; and Tunicamycin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box-like domain superfamily; FTH domain; F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; and F-box A protein FB224. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: ZC47.3
    Corresponding_CDS_history: ZC47.3a:wp144
      ZC47.3b:wp144
    Corresponding_transcript: ZC47.3.1
      ZC47.3.2
    Associated_feature: WBsf991266
      WBsf1014209
  Experimental_info: RNAi_result: WBRNAi00006246 Inferred_automatically: RNAi_primary
      WBRNAi00058948 Inferred_automatically: RNAi_primary
      WBRNAi00021714 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1012952
      Expr1162385
      Expr2011536
      Expr2029773
    Drives_construct: WBCnstr00029515
    Construct_product: WBCnstr00029515
    Microarray_results (14)
    Expression_cluster (100)
    Interaction: WBInteraction000347029
      WBInteraction000366214
      WBInteraction000504150
  Map_info: Map: III Position: -22.5656 Error: 0.001705
    Positive: Positive_clone: ZC47 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene