WormBase Tree Display for Gene: WBGene00013778
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| WBGene00013778 | SMap | S_parent | Sequence | Y116A8A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | clec-194 | Person_evidence | WBPerson2531 | |||||
| Sequence_name | Y116A8A.8 | ||||||||
| Molecular_name | Y116A8A.8 | ||||||||
| Y116A8A.8.1 | |||||||||
| CE43905 | |||||||||
| Other_name | CELE_Y116A8A.8 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | clec-194 | ||||||||
| DB_info | Database | AceView | gene | 4R777 | |||||
| WormQTL | gene | WBGene00013778 | |||||||
| WormFlux | gene | WBGene00013778 | |||||||
| NDB | locus_tag | CELE_Y116A8A.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013778|UniProtKB=Q9U2W5 | |||||||
| family | PTHR23124 | ||||||||
| NCBI | gene | 178467 | |||||||
| RefSeq | protein | NM_070595.5 | |||||||
| TREEFAM | TREEFAM_ID | TF315870 | |||||||
| TrEMBL | UniProtAcc | Q9U2W5 | |||||||
| UniProt_GCRP | UniProtAcc | Q9U2W5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 09 Oct 2007 15:40:27 | WBPerson2970 | Name_change | CGC_name | clec-194 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clec | ||||||||
| Allele (40) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (11) | |||||||||
| Paralog (126) | |||||||||
| Structured_description | Automated_description | Enriched in excretory gland cell and neurons based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including sir-2.1; pgl-1; and aak-2 based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: C-type lectin fold; PAN-3 domain; C-type lectin-like/link domain superfamily; PAN-like domain; and C-type lectin-like. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y116A8A.8 | |||||||
| Corresponding_CDS_history | Y116A8A.8:wp204 | ||||||||
| Corresponding_transcript | Y116A8A.8.1 | ||||||||
| Associated_feature | WBsf646593 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00022470 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00055419 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1016523 | ||||||||
| Expr1158934 | |||||||||
| Expr2010108 | |||||||||
| Expr2028351 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (63) | |||||||||
| Map_info | Map | IV | Position | 15.3214 | |||||
| Positive | Positive_clone | Y116A8A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
