WormBase Tree Display for Gene: WBGene00013758
expand all nodes | collapse all nodes | view schema
WBGene00013758 | SMap | S_parent | Sequence | Y113G7B | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | fbxa-114 | Person_evidence | WBPerson655 | |||
Sequence_name | Y113G7B.7 | ||||||
Molecular_name | Y113G7B.7 | ||||||
Y113G7B.7.1 | |||||||
CE23289 | |||||||
Other_name | CELE_Y113G7B.7 | Accession_evidence | NDB | BX284605 | |||
Public_name | fbxa-114 | ||||||
DB_info | Database (10) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | fbxa | ||||||
Allele (108) | |||||||
RNASeq_FPKM (74) | |||||||
Contained_in_operon | CEOP5504 | ||||||
Ortholog (17) | |||||||
Paralog (225) | |||||||
Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. | Paper_evidence | WBPaper00012854 | |||
Curator_confirmed | WBPerson567 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Enriched in germ line; germline precursor cell; head mesodermal cell; intestine; and neurons based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including glp-1; eat-2; and elt-2 based on microarray and RNA-seq studies. Is affected by ten chemicals including manganese chloride; metformin; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box-like domain superfamily; FTH domain; F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; and F-box A protein FB224. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y113G7B.7 | |||||
Corresponding_transcript | Y113G7B.7.1 | ||||||
Experimental_info | RNAi_result | WBRNAi00055409 | Inferred_automatically | RNAi_primary | |||
WBRNAi00019900 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00081082 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00036594 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00062417 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1024237 | ||||||
Expr1158924 | |||||||
Expr2011460 | |||||||
Expr2029698 | |||||||
Microarray_results (15) | |||||||
Expression_cluster (104) | |||||||
Interaction (33) | |||||||
Map_info | Map | V | Position | 24.9294 | Error | 0.003417 | |
Positive | Positive_clone | Y113G7B | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00012854 | ||||||
WBPaper00034662 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |