WormBase Tree Display for Gene: WBGene00013755

WBGene00013755 SMap: S_parent: Sequence: Y113G7B
  Identity: Version: 2
    Name: CGC_name: fbxa-115 Person_evidence: WBPerson655
      Sequence_name: Y113G7B.3
      Molecular_name: Y113G7B.3
        Y113G7B.3.1
        CE24144
      Other_name: CELE_Y113G7B.3 Accession_evidence: NDB BX284605
      Public_name: fbxa-115
    DB_info: Database: AceView gene 5U654
        WormQTL gene WBGene00013755
        WormFlux gene WBGene00013755
        NDB locus_tag CELE_Y113G7B.3
        Panther gene CAEEL|WormBase=WBGene00013755|UniProtKB=Q9U2W8
          family PTHR23015
        NCBI gene 190970
        RefSeq protein NM_075492.5
        TREEFAM TREEFAM_ID TF322006
        TrEMBL UniProtAcc Q9U2W8
        UniProt_GCRP UniProtAcc Q9U2W8
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:55 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 12 Dec 2005 15:18:56 WBPerson2970 Name_change: CGC_name: fbxa-115
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxa
    Allele (113)
    RNASeq_FPKM (74)
    Contained_in_operon: CEOP5580
    Ortholog (17)
    Paralog (225)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in several structures, including intestine; male distal tip cell; neurons; retrovesicular ganglion; and somatic gonad precursor based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including skn-1; hsf-1; and eat-2 based on microarray and RNA-seq studies. Is affected by fourteen chemicals including methylmercuric chloride; Alovudine; and Psoralens based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box-like domain superfamily; FTH domain; F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; and F-box A protein FB224. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y113G7B.3
    Corresponding_transcript: Y113G7B.3.1
  Experimental_info: RNAi_result: WBRNAi00055405 Inferred_automatically: RNAi_primary
      WBRNAi00036591 Inferred_automatically: RNAi_primary
      WBRNAi00019897 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1020825
      Expr1158920
      Expr2011461
      Expr2029699
    Drives_construct: WBCnstr00029532
    Construct_product: WBCnstr00029532
    Microarray_results (17)
    Expression_cluster (162)
    Interaction: WBInteraction000400749
      WBInteraction000549980
      WBInteraction000549995
      WBInteraction000550000
  Map_info: Map: V Position: 24.8867 Error: 0.003435
    Positive: Positive_clone: Y113G7B Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00012854
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene