WormBase Tree Display for Gene: WBGene00013687
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| WBGene00013687 | SMap | S_parent | Sequence | Y105E8B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | exoc-8 | Person_evidence | WBPerson1683 | |||||
| WBPerson804 | |||||||||
| Sequence_name | Y105E8B.2 | ||||||||
| Molecular_name | Y105E8B.2a | ||||||||
| Y105E8B.2a.1 | |||||||||
| CE28785 | |||||||||
| Y105E8B.2b | |||||||||
| CE34105 | |||||||||
| Y105E8B.2b.1 | |||||||||
| Other_name | Y105E8B.d | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| Y105E8B.e | Curator_confirmed | WBPerson1983 | |||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y105E8B.2 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | exoc-8 | ||||||||
| DB_info | Database | AceView | gene | 1P228 | |||||
| WormQTL | gene | WBGene00013687 | |||||||
| WormFlux | gene | WBGene00013687 | |||||||
| NDB | locus_tag | CELE_Y105E8B.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013687|UniProtKB=Q95Q35 | |||||||
| family | PTHR21426 | ||||||||
| NCBI | gene | 173320 | |||||||
| RefSeq | protein | NM_001026531.6 | |||||||
| NM_001373669.4 | |||||||||
| TREEFAM | TREEFAM_ID | TF105819 | |||||||
| TrEMBL | UniProtAcc | Q7YTV2 | |||||||
| Q95Q35 | |||||||||
| UniProt_GCRP | UniProtAcc | Q95Q35 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 16 Oct 2006 17:00:28 | WBPerson2970 | Name_change | CGC_name | exoc-8 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | exoc | ||||||||
| Allele (170) | |||||||||
| Strain | WBStrain00032613 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00082616 | ||||||||
| 00082617 | |||||||||
| 00082618 | |||||||||
| 00088158 | |||||||||
| 00088159 | |||||||||
| 00088160 | |||||||||
| 00120496 | |||||||||
| 00120497 | |||||||||
| Ortholog (35) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in Golgi to plasma membrane transport and protein localization. Predicted to be part of exocyst. Expressed in PVDL and PVDR. Is an ortholog of human EXOC8 (exocyst complex component 8). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y105E8B.2a | |||||||
| Y105E8B.2b | |||||||||
| Corresponding_transcript | Y105E8B.2a.1 | ||||||||
| Y105E8B.2b.1 | |||||||||
| Other_sequence (21) | |||||||||
| Associated_feature | WBsf649769 | ||||||||
| WBsf665148 | |||||||||
| WBsf976623 | |||||||||
| WBsf976624 | |||||||||
| WBsf976625 | |||||||||
| WBsf220632 | |||||||||
| WBsf220633 | |||||||||
| WBsf220634 | |||||||||
| WBsf220635 | |||||||||
| Experimental_info | RNAi_result (24) | ||||||||
| Expr_pattern | Expr12469 | ||||||||
| Expr1022942 | |||||||||
| Expr1036116 | |||||||||
| Expr1158777 | |||||||||
| Expr2011399 | |||||||||
| Expr2029635 | |||||||||
| Construct_product | WBCnstr00020951 | ||||||||
| Microarray_results (32) | |||||||||
| Expression_cluster (127) | |||||||||
| Interaction (18) | |||||||||
| Map_info | Map | I | Position | 25.8823 | Error | 0.030091 | |||
| Positive | Positive_clone | Y105E8B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (12) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
