WormBase Tree Display for Gene: WBGene00013603
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| WBGene00013603 | SMap | S_parent | Sequence | Y87G2A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | soem-1 | Paper_evidence | WBPaper00050367 | |||||
| Person_evidence | WBPerson3772 | ||||||||
| Sequence_name | Y87G2A.17 | ||||||||
| Molecular_name | Y87G2A.17 | ||||||||
| Y87G2A.17.1 | |||||||||
| CE35142 | |||||||||
| Y87G2A.17.2 | |||||||||
| Other_name | CELE_Y87G2A.17 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | soem-1 | ||||||||
| DB_info | Database | AceView | gene | 1O84 | |||||
| WormQTL | gene | WBGene00013603 | |||||||
| SignaLink | protein | WBGene00013603 | |||||||
| WormFlux | gene | WBGene00013603 | |||||||
| NDB | locus_tag | CELE_Y87G2A.17 | |||||||
| NCBI | gene | 3565861 | |||||||
| RefSeq | protein | NM_001026662.6 | |||||||
| SwissProt | UniProtAcc | Q7YWN4 | |||||||
| UniProt_GCRP | UniProtAcc | Q7YWN4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 29 Nov 2016 15:14:00 | WBPerson2970 | Name_change | CGC_name | soem-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | soem | ||||||||
| Allele (129) | |||||||||
| Strain | WBStrain00052152 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP1996 | ||||||||
| Ortholog (37) | |||||||||
| Structured_description | Automated_description | Expressed in PQR. Human SHB enables phosphotyrosine residue binding activity. Is predicted to encode a protein with the following domains: SH2 domain superfamily and SH2 domain. Is an ortholog of human SHB (SH2 domain containing adaptor protein B). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y87G2A.17 | |||||||
| Corresponding_transcript | Y87G2A.17.1 | ||||||||
| Y87G2A.17.2 | |||||||||
| Other_sequence (14) | |||||||||
| Associated_feature | WBsf985876 | ||||||||
| WBsf985877 | |||||||||
| WBsf1011084 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00004836 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr13647 | ||||||||
| Expr1026377 | |||||||||
| Expr1036086 | |||||||||
| Expr1162022 | |||||||||
| Expr2016001 | |||||||||
| Expr2034236 | |||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (87) | |||||||||
| Interaction (11) | |||||||||
| Map_info | Map | I | Position | 21.0022 | |||||
| Positive | Positive_clone | Y87G2A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00050367 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
