WormBase Tree Display for Gene: WBGene00013486
expand all nodes | collapse all nodes | view schema
| WBGene00013486 | SMap | S_parent | Sequence | Y69H2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | egas-1 | Person_evidence | WBPerson260 | |||||
| Sequence_name | Y69H2.11 | ||||||||
| Molecular_name | Y69H2.11 | ||||||||
| Y69H2.11.1 | |||||||||
| CE53423 | |||||||||
| Other_name | CELE_Y69H2.11 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | egas-1 | ||||||||
| DB_info | Database | AceView | gene | 5T127 | |||||
| WormQTL | gene | WBGene00013486 | |||||||
| WormFlux | gene | WBGene00013486 | |||||||
| NDB | locus_tag | CELE_Y69H2.11 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013486|UniProtKB=Q9U1T9 | |||||||
| family | PTHR11690 | ||||||||
| NCBI | gene | 180219 | |||||||
| RefSeq | protein | NM_001373187.3 | |||||||
| TREEFAM | TREEFAM_ID | TF317265 | |||||||
| TrEMBL | UniProtAcc | Q9U1T9 | |||||||
| UniProt_GCRP | UniProtAcc | Q9U1T9 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 24 Feb 2012 15:34:46 | WBPerson2970 | Name_change | CGC_name | egas-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | egas | ||||||||
| Allele (249) | |||||||||
| Strain | WBStrain00033196 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog (51) | |||||||||
| Paralog (40) | |||||||||
| Structured_description | Automated_description | Predicted to enable ligand-gated sodium channel activity. Predicted to be involved in sodium ion transmembrane transport. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y69H2.11 | |||||||
| Corresponding_CDS_history | Y69H2.11:wp180 | ||||||||
| Y69H2.11:wp234 | |||||||||
| Y69H2.11:wp271 | |||||||||
| Corresponding_transcript | Y69H2.11.1 | ||||||||
| Other_sequence | MH10284 | ||||||||
| GP01192 | |||||||||
| MH10937 | |||||||||
| Associated_feature (11) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00021333 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00058075 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1024180 | ||||||||
| Expr1161489 | |||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (59) | |||||||||
| Interaction (26) | |||||||||
| Map_info | Map | V | Position | 17.1169 | |||||
| Positive | Positive_clone | Y69H2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027280 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064563 | |||||||||
| WBPaper00065330 | |||||||||
| WBPaper00065804 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
