WormBase Tree Display for Gene: WBGene00013470
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WBGene00013470 | SMap | S_parent | Sequence | CHROMOSOME_V | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | clec-243 | Person_evidence | WBPerson2531 | |||||
Sequence_name | Y68A4B.1 | ||||||||
Molecular_name | Y68A4B.1 | ||||||||
Y68A4B.1.1 | |||||||||
CE42298 | |||||||||
Other_name | CELE_Y68A4B.1 | Accession_evidence | NDB | BX284605 | |||||
Public_name | clec-243 | ||||||||
DB_info | Database | AceView | gene | 5R726 | |||||
WormQTL | gene | WBGene00013470 | |||||||
WormFlux | gene | WBGene00013470 | |||||||
NDB | locus_tag | CELE_Y68A4B.1 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00013470|UniProtKB=G5EG12 | |||||||
family | PTHR23124 | ||||||||
NCBI | gene | 190530 | |||||||
RefSeq | protein | NM_074969.3 | |||||||
TREEFAM | TREEFAM_ID | TF315870 | |||||||
TrEMBL | UniProtAcc | G5EG12 | |||||||
UniProt_GCRP | UniProtAcc | G5EG12 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 09 Oct 2007 15:40:27 | WBPerson2970 | Name_change | CGC_name | clec-243 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | clec | ||||||||
Allele (95) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (94) | |||||||||
Paralog (128) | |||||||||
Structured_description | Automated_description | Is affected by several genes including clk-1; aak-2; and bar-1 based on tiling array; microarray; and RNA-seq studies. Is affected by dibromoacetic acid; dafa#1; and allantoin based on microarray studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y68A4B.1 | |||||||
Corresponding_CDS_history | Y68A4B.1:wp185 | ||||||||
Y68A4B.1:wp188 | |||||||||
Corresponding_transcript | Y68A4B.1.1 | ||||||||
Other_sequence | CRC02015_1 | ||||||||
CR08307 | |||||||||
Associated_feature | WBsf1002627 | ||||||||
WBsf1021250 | |||||||||
Experimental_info | RNAi_result | WBRNAi00058024 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00021290 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1022458 | ||||||||
Expr1161443 | |||||||||
Expr2028386 | |||||||||
Drives_construct | WBCnstr00029627 | ||||||||
Construct_product | WBCnstr00029627 | ||||||||
Microarray_results (14) | |||||||||
Expression_cluster (38) | |||||||||
Interaction (66) | |||||||||
Map_info | Map | V | Position | 12.8418 | Error | 0.0006 | |||
Positive | Positive_clone | Y68A4B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |