WormBase Tree Display for Gene: WBGene00013233
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WBGene00013233 | SMap | S_parent | Sequence | Y56A3A | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||||
Name | CGC_name | sdz-33 | Paper_evidence | WBPaper00024645 | |||||
Person_evidence | WBPerson374 | ||||||||
Sequence_name | Y56A3A.14 | ||||||||
Molecular_name | Y56A3A.14 | ||||||||
Y56A3A.14.1 | |||||||||
CE22581 | |||||||||
Other_name | fbxb-23 | Person_evidence | WBPerson655 | ||||||
CELE_Y56A3A.14 | Accession_evidence | NDB | BX284603 | ||||||
Public_name | sdz-33 | ||||||||
DB_info | Database | AceView | gene | 3M997 | |||||
WormQTL | gene | WBGene00013233 | |||||||
WormFlux | gene | WBGene00013233 | |||||||
NDB | locus_tag | CELE_Y56A3A.14 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00013233|UniProtKB=Q9U232 | |||||||
family | PTHR22899 | ||||||||
NCBI | gene | 176621 | |||||||
RefSeq | protein | NM_067145.4 | |||||||
TrEMBL | UniProtAcc | Q9U232 | |||||||
UniProt_GCRP | UniProtAcc | Q9U232 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 19 Aug 2005 17:08:06 | WBPerson2970 | Name_change | CGC_name | sdz-33 | ||||
3 | 13 Dec 2005 13:51:45 | WBPerson2970 | Name_change | Other_name | fbxb-23 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | sdz | ||||||||
Allele (34) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (26) | |||||||||
Paralog (145) | |||||||||
Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins. | Paper_evidence | WBPaper00012854 | |||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Expressed in several structures, including Caa; Cap; Cpa; Ea; and Psub4. Is predicted to encode a protein with the following domains: F-box domain; F-box associated; and F-box associated domain, type 2. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y56A3A.14 | |||||||
Corresponding_transcript | Y56A3A.14.1 | ||||||||
Associated_feature | WBsf645642 | ||||||||
WBsf659591 | |||||||||
WBsf225868 | |||||||||
Experimental_info | RNAi_result | WBRNAi00021067 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00037538 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00037539 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00057573 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00006877 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr3147 | ||||||||
Expr1035891 | |||||||||
Expr1161001 | |||||||||
Expr2015691 | |||||||||
Expr2033924 | |||||||||
Drives_construct | WBCnstr00011175 | ||||||||
Microarray_results (12) | |||||||||
Expression_cluster (133) | |||||||||
Interaction (210) | |||||||||
Map_info | Map | III | Position | 13.3094 | Error | 0.009135 | |||
Positive | Positive_clone | Y56A3A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 5445 | |||||||
5020 | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00012854 | ||||||||
WBPaper00057006 | |||||||||
WBPaper00060964 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |