WormBase Tree Display for Gene: WBGene00013231
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| WBGene00013231 | SMap | S_parent | Sequence | Y56A3A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | tsen-2 | Person_evidence | WBPerson236 | |||||
| Sequence_name | Y56A3A.11 | ||||||||
| Molecular_name | Y56A3A.11 | ||||||||
| Y56A3A.11.1 | |||||||||
| CE31839 | |||||||||
| Other_name | CELE_Y56A3A.11 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | tsen-2 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 18 Nov 2014 11:51:19 | WBPerson2970 | Name_change | CGC_name | tsen-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tsen | ||||||||
| Allele (113) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00098620 | ||||||||
| 00098621 | |||||||||
| 00098622 | |||||||||
| 00098623 | |||||||||
| 00098624 | |||||||||
| 00098625 | |||||||||
| 00120135 | |||||||||
| 00120136 | |||||||||
| 00120137 | |||||||||
| Contained_in_operon | CEOP3736 | ||||||||
| Ortholog (18) | |||||||||
| Structured_description | Automated_description | Predicted to enable tRNA-intron endonuclease activity. Predicted to be involved in tRNA-type intron splice site recognition and cleavage. Predicted to be located in nucleus. Predicted to be part of tRNA-intron endonuclease complex. Human ortholog(s) of this gene implicated in pontocerebellar hypoplasia type 2B. Is an ortholog of human TSEN2 (tRNA splicing endonuclease subunit 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0060268 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:28422) | ||||
| Molecular_info | Corresponding_CDS | Y56A3A.11 | |||||||
| Corresponding_CDS_history | Y56A3A.11:wp59 | ||||||||
| Y56A3A.11:wp85 | |||||||||
| Corresponding_transcript | Y56A3A.11.1 | ||||||||
| Other_sequence | JI470553.1 | ||||||||
| MH09645 | |||||||||
| JI481642.1 | |||||||||
| Associated_feature | WBsf994526 | ||||||||
| WBsf994527 | |||||||||
| WBsf1016108 | |||||||||
| WBsf1016109 | |||||||||
| WBsf227610 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00057569 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00007084 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1016017 | ||||||||
| Expr1035889 | |||||||||
| Expr1160998 | |||||||||
| Expr2017533 | |||||||||
| Expr2035671 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (79) | |||||||||
| Interaction (12) | |||||||||
| Map_info | Positive | Positive_clone | Y56A3A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | 13.2985 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00049237 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
