WormBase Tree Display for Gene: WBGene00013202
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| WBGene00013202 | SMap | S_parent | Sequence | Y54E5A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | gid-1 | Person_evidence | WBPerson48679 | |||||
| Sequence_name | Y54E5A.7 | ||||||||
| Molecular_name (15) | |||||||||
| Other_name | CELE_Y54E5A.7 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | gid-1 | ||||||||
| DB_info | Database | AceView | gene | 1P305 | |||||
| WormQTL | gene | WBGene00013202 | |||||||
| WormFlux | gene | WBGene00013202 | |||||||
| NDB | locus_tag | CELE_Y54E5A.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013202|UniProtKB=Q9XWK4 | |||||||
| family | PTHR12864 | ||||||||
| NCBI | gene | 173332 | |||||||
| RefSeq | protein | NM_001265480.3 | |||||||
| NM_001395800.1 | |||||||||
| NM_001265479.3 | |||||||||
| NM_001265481.3 | |||||||||
| NM_001265482.3 | |||||||||
| TREEFAM | TREEFAM_ID | TF331658 | |||||||
| TrEMBL | UniProtAcc | F3Y5R0 | |||||||
| Q9XWK4 | |||||||||
| A0A8D9MH54 | |||||||||
| F3Y5R2 | |||||||||
| F3Y5R1 | |||||||||
| UniProt_GCRP | UniProtAcc | Q9XWK4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 10 Jul 2021 01:24:03 | WBPerson1983 | Name_change | CGC_name | gid-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gid | ||||||||
| Allele (69) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (38) | |||||||||
| Paralog | WBGene00018757 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Expressed in germ line and oocyte. Human RANBP9 enables enzyme binding activity. Is predicted to encode a protein with the following domain: CTLH, C-terminal LisH motif. Is an ortholog of human RANBP10 (RAN binding protein 10) and RANBP9 (RAN binding protein 9). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y54E5A.7a | |||||||
| Y54E5A.7b | |||||||||
| Y54E5A.7c | |||||||||
| Y54E5A.7d | |||||||||
| Y54E5A.7e | |||||||||
| Corresponding_transcript | Y54E5A.7a.1 | ||||||||
| Y54E5A.7b.1 | |||||||||
| Y54E5A.7c.1 | |||||||||
| Y54E5A.7d.1 | |||||||||
| Y54E5A.7e.1 | |||||||||
| Other_sequence | JI165031.1 | ||||||||
| JI167015.1 | |||||||||
| EX916494.1 | |||||||||
| JI173468.1 | |||||||||
| XI04766 | |||||||||
| HBC03573_1 | |||||||||
| JI166419.1 | |||||||||
| XIC05399_1 | |||||||||
| Associated_feature | WBsf643851 | ||||||||
| WBsf657103 | |||||||||
| WBsf657104 | |||||||||
| WBsf1011283 | |||||||||
| WBsf218814 | |||||||||
| WBsf218815 | |||||||||
| WBsf218816 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00065296 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00037478 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00057386 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004744 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00117008 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram491 | ||||||||
| Expr7044 | |||||||||
| Expr9712 | |||||||||
| Expr1020219 | |||||||||
| Expr1035869 | |||||||||
| Expr1160820 | |||||||||
| Expr2007904 | |||||||||
| Expr2026146 | |||||||||
| Drives_construct | WBCnstr00002342 | ||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (98) | |||||||||
| Interaction (29) | |||||||||
| Map_info | Map | I | Position | 26.4122 | |||||
| Positive | Positive_clone | Y54E5A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064339 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
