WormBase Tree Display for Gene: WBGene00013122
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| WBGene00013122 | SMap | S_parent | Sequence | Y52B11A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | impt-1 | Person_evidence | WBPerson19150 | |||||
| Sequence_name | Y52B11A.2 | ||||||||
| Molecular_name | Y52B11A.2a | ||||||||
| Y52B11A.2a.1 | |||||||||
| CE20291 | |||||||||
| Y52B11A.2b | |||||||||
| CE36243 | |||||||||
| Y52B11A.2b.1 | |||||||||
| Other_name | CELE_Y52B11A.2 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | impt-1 | ||||||||
| DB_info | Database | AceView | gene | 1L558 | |||||
| WormQTL | gene | WBGene00013122 | |||||||
| WormFlux | gene | WBGene00013122 | |||||||
| NDB | locus_tag | CELE_Y52B11A.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013122|UniProtKB=Q9XWF4 | |||||||
| family | PTHR16301 | ||||||||
| NCBI | gene | 173001 | |||||||
| RefSeq | protein | NM_001026611.4 | |||||||
| NM_001392943.1 | |||||||||
| SwissProt | UniProtAcc | Q9XWF4 | |||||||
| TREEFAM | TREEFAM_ID | TF314823 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XWF4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 01 Jun 2015 15:07:11 | WBPerson2970 | Name_change | CGC_name | impt-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | impt | ||||||||
| Allele (61) | |||||||||
| Strain | WBStrain00001894 | ||||||||
| WBStrain00037373 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00103458 | ||||||||
| 00103459 | |||||||||
| 00103460 | |||||||||
| 00103461 | |||||||||
| 00103462 | |||||||||
| 00103463 | |||||||||
| 00103464 | |||||||||
| 00103465 | |||||||||
| 00103466 | |||||||||
| Ortholog (34) | |||||||||
| Structured_description | Automated_description | Predicted to enable protein sequestering activity. Predicted to be involved in cellular response to amino acid starvation and regulation of cytoplasmic translational initiation in response to stress. Predicted to be located in cytoplasm. Is an ortholog of human IMPACT (impact RWD domain protein). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y52B11A.2a | |||||||
| Y52B11A.2b | |||||||||
| Corresponding_transcript | Y52B11A.2a.1 | ||||||||
| Y52B11A.2b.1 | |||||||||
| Other_sequence (13) | |||||||||
| Associated_feature | WBsf976571 | ||||||||
| WBsf976572 | |||||||||
| WBsf979074 | |||||||||
| WBsf220305 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00112185 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00062449 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004695 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00037385 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00112184 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00117002 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00112183 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00057220 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram321 | ||||||||
| Expr7030 | |||||||||
| Expr1012290 | |||||||||
| Expr1035819 | |||||||||
| Expr1160657 | |||||||||
| Expr2012739 | |||||||||
| Expr2030976 | |||||||||
| Drives_construct | WBCnstr00002685 | ||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (96) | |||||||||
| Interaction (15) | |||||||||
| Map_info | Map | I | Position | 6.21108 | |||||
| Positive | Positive_clone | Y52B11A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00050240 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064339 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
