WormBase Tree Display for Gene: WBGene00013041
expand all nodes | collapse all nodes | view schema
| WBGene00013041 | SMap | S_parent | Sequence | Y49E10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | pstk-1 | Person_evidence | WBPerson5890 | |||||
| Sequence_name | Y49E10.22 | ||||||||
| Molecular_name | Y49E10.22 | ||||||||
| Y49E10.22.1 | |||||||||
| CE28856 | |||||||||
| Other_name | CELE_Y49E10.22 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | pstk-1 | ||||||||
| DB_info | Database | AceView | gene | 3N555 | |||||
| WormQTL | gene | WBGene00013041 | |||||||
| WormFlux | gene | WBGene00013041 | |||||||
| NDB | locus_tag | CELE_Y49E10.22 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013041|UniProtKB=Q9XTU1 | |||||||
| family | PTHR20873 | ||||||||
| NCBI | gene | 190070 | |||||||
| RefSeq | protein | NM_067226.2 | |||||||
| TREEFAM | TREEFAM_ID | TF321264 | |||||||
| TrEMBL | UniProtAcc | Q9XTU1 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XTU1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 23 Feb 2007 15:37:00 | WBPerson2970 | Name_change | CGC_name | pstk-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pstk | ||||||||
| Allele (31) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00101179 | ||||||||
| 00101180 | |||||||||
| 00101181 | |||||||||
| 00101182 | |||||||||
| 00101183 | |||||||||
| 00101184 | |||||||||
| Contained_in_operon | CEOP3893 | ||||||||
| Ortholog (24) | |||||||||
| Structured_description | Automated_description | Predicted to enable kinase activity and tRNA binding activity. Predicted to be involved in phosphorylation. Is an ortholog of human PSTK (phosphoseryl-tRNA kinase). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y49E10.22 | |||||||
| Corresponding_CDS_history | Y49E10.22:wp59 | ||||||||
| Corresponding_transcript | Y49E10.22.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00002689 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00057018 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00037294 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025224 | ||||||||
| Expr1160461 | |||||||||
| Expr2015141 | |||||||||
| Expr2033379 | |||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (81) | |||||||||
| Interaction | WBInteraction000441472 | ||||||||
| WBInteraction000455215 | |||||||||
| Map_info | Map | III | Position | 17.9289 | Error | 0.009964 | |||
| Positive | Positive_clone | Y49E10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
