WormBase Tree Display for Gene: WBGene00013009
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| WBGene00013009 | SMap | S_parent | Sequence | Y48E1B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | fbxc-23 | Person_evidence | WBPerson655 | |||||
| Sequence_name | Y48E1B.11 | ||||||||
| Molecular_name | Y48E1B.11 | ||||||||
| Y48E1B.11.1 | |||||||||
| CE44418 | |||||||||
| Other_name | fbxc-56 | ||||||||
| CELE_Y48E1B.11 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | fbxc-23 | ||||||||
| DB_info | Database | AceView | gene | 2N886 | |||||
| WormQTL | gene | WBGene00013009 | |||||||
| WormFlux | gene | WBGene00013009 | |||||||
| NDB | locus_tag | CELE_Y48E1B.11 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013009|UniProtKB=O18201 | |||||||
| family | PTHR31379 | ||||||||
| NCBI | gene | 190029 | |||||||
| RefSeq | protein | NM_064454.3 | |||||||
| TrEMBL | UniProtAcc | O18201 | |||||||
| UniProt_GCRP | UniProtAcc | O18201 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 17 Jun 2008 14:44:53 | WBPerson2970 | Name_change | CGC_name | fbxc-56 | ||||
| 3 | 04 Dec 2009 10:23:36 | WBPerson1983 | Event | Acquires_merge | WBGene00013012 | ||||
| Name_change | CGC_name | fbxc-23 | |||||||
| Acquires_merge | WBGene00013012 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxc | ||||||||
| Allele (53) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (16) | |||||||||
| Paralog (31) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABaraapapp; ABaraapppp; AVE; B cell; and intestine based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including glp-1; hsf-1; and eat-2 based on tiling array; microarray; and RNA-seq studies. Is affected by seven chemicals including Rifampin; allantoin; and antimycin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Protein of unknown function DUF3557. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y48E1B.11 | |||||||
| Corresponding_CDS_history | Y48E1B.11:wp210 | ||||||||
| Y48E1B.15:wp124 | |||||||||
| Y48E1B.15:wp210 | |||||||||
| Corresponding_transcript | Y48E1B.11.1 | ||||||||
| Associated_feature | WBsf650695 | ||||||||
| WBsf990463 | |||||||||
| WBsf1013664 | |||||||||
| WBsf224189 | |||||||||
| WBsf224190 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00020754 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1011214 | ||||||||
| Expr1160359 | |||||||||
| Expr2011709 | |||||||||
| Expr2029948 | |||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (115) | |||||||||
| Interaction | WBInteraction000289968 | ||||||||
| WBInteraction000397693 | |||||||||
| Map_info | Map | II | Position | 18.3558 | Error | 0.026067 | |||
| Positive | Positive_clone | Y48E1B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
