WormBase Tree Display for Gene: WBGene00012983
expand all nodes | collapse all nodes | view schema
| WBGene00012983 | SMap | S_parent | Sequence | Y48B6A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | men-1 | Person_evidence | WBPerson260 | |||||
| Sequence_name | Y48B6A.12 | ||||||||
| Molecular_name | Y48B6A.12 | ||||||||
| Y48B6A.12.1 | |||||||||
| CE22127 | |||||||||
| Y48B6A.12.2 | |||||||||
| Other_name | CELE_Y48B6A.12 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | men-1 | ||||||||
| DB_info | Database | AceView | gene | 2O518 | |||||
| WormQTL | gene | WBGene00012983 | |||||||
| WormFlux | gene | WBGene00012983 | |||||||
| NDB | locus_tag | CELE_Y48B6A.12 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012983|UniProtKB=Q9U296 | |||||||
| family | PTHR23406 | ||||||||
| NCBI | gene | 175079 | |||||||
| RefSeq | protein | NM_064567.7 | |||||||
| TREEFAM | TREEFAM_ID | TF300537 | |||||||
| TrEMBL | UniProtAcc | Q9U296 | |||||||
| UniProt_GCRP | UniProtAcc | Q9U296 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 01 Apr 2010 13:55:15 | WBPerson2970 | Name_change | CGC_name | men-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | men | ||||||||
| Allele (234) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00098855 | ||||||||
| 00098856 | |||||||||
| 00098857 | |||||||||
| 00098858 | |||||||||
| 00098859 | |||||||||
| 00098860 | |||||||||
| 00098861 | |||||||||
| 00119936 | |||||||||
| 00119937 | |||||||||
| 00119938 | |||||||||
| Contained_in_operon | CEOP2700 | ||||||||
| Ortholog (54) | |||||||||
| Structured_description | Automated_description | Predicted to enable malate dehydrogenase (decarboxylating) (NADP+) activity. Predicted to be involved in malate metabolic process and pyruvate metabolic process. Predicted to be located in mitochondrion. Is an ortholog of human ME1 (malic enzyme 1) and ME3 (malic enzyme 3). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y48B6A.12 | |||||||
| Corresponding_transcript | Y48B6A.12.1 | ||||||||
| Y48B6A.12.2 | |||||||||
| Other_sequence (280) | |||||||||
| Associated_feature | WBsf650739 | ||||||||
| WBsf650740 | |||||||||
| WBsf666362 | |||||||||
| WBsf990658 | |||||||||
| WBsf990659 | |||||||||
| WBsf1013804 | |||||||||
| WBsf224254 | |||||||||
| WBsf224255 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00103600 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00020733 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00056877 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00022668 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00037230 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1018998 | ||||||||
| Expr1035761 | |||||||||
| Expr1160329 | |||||||||
| Expr2013527 | |||||||||
| Expr2031761 | |||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (121) | |||||||||
| Interaction (96) | |||||||||
| Map_info | Map | II | Position | 22.8823 | Error | 0.003528 | |||
| Positive | Positive_clone | Y48B6A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00031648 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00059852 | |||||||||
| WBPaper00064763 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
