WormBase Tree Display for Gene: WBGene00012977
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WBGene00012977 | SMap | S_parent | Sequence | Y48A6C | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | Y48A6C.4 | |||||||
Molecular_name | Y48A6C.4 | ||||||||
Y48A6C.4.1 | |||||||||
CE43502 | |||||||||
Other_name | CELE_Y48A6C.4 | Accession_evidence | NDB | BX284603 | |||||
Public_name | Y48A6C.4 | ||||||||
DB_info | Database | AceView | gene | 3M213 | |||||
WormQTL | gene | WBGene00012977 | |||||||
WormFlux | gene | WBGene00012977 | |||||||
NDB | locus_tag | CELE_Y48A6C.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00012977|UniProtKB=Q9XWK5 | |||||||
family | PTHR16056 | ||||||||
NCBI | gene | 190016 | |||||||
RefSeq | protein | NM_067032.4 | |||||||
TREEFAM | TREEFAM_ID | TF318197 | |||||||
TrEMBL | UniProtAcc | Q9XWK5 | |||||||
UniProt_GCRP | UniProtAcc | Q9XWK5 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (96) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00103625 | ||||||||
00103626 | |||||||||
00103627 | |||||||||
00103628 | |||||||||
Ortholog (33) | |||||||||
Paralog (7) | |||||||||
Structured_description | Concise_description | Y48A6C.4 encodes an ortholog of S. cerevisiae IPI1 that may suppress tumorous growth in the germ line by ensuring robust larval germline proliferation; like PRO-1, -2, and -3, Y48A6C.4 is probably required for ribosome biogenesis, suggesting a link between biogenesis in the distal sheath and control of cell division in the germ line. | Paper_evidence | WBPaper00028280 | |||||
WBPaper00028929 | |||||||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 23 Apr 2008 00:00:00 | ||||||||
Automated_description | Predicted to be located in nucleus. Predicted to be part of MLL1 complex. Is an ortholog of human TEX10 (testis expressed 10). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y48A6C.4 | |||||||
Corresponding_CDS_history | Y48A6C.4:wp200 | ||||||||
Corresponding_transcript | Y48A6C.4.1 | ||||||||
Other_sequence (8) | |||||||||
Associated_feature | WBsf645601 | ||||||||
WBsf994276 | |||||||||
WBsf994277 | |||||||||
WBsf1015929 | |||||||||
WBsf1015930 | |||||||||
WBsf225794 | |||||||||
WBsf225795 | |||||||||
Experimental_info | RNAi_result | WBRNAi00006365 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00009350 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00026750 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00071666 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00071364 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00002637 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00056871 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00037226 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1021678 | ||||||||
Expr1035755 | |||||||||
Expr1160323 | |||||||||
Expr2007653 | |||||||||
Expr2025893 | |||||||||
Microarray_results (22) | |||||||||
Expression_cluster (79) | |||||||||
Interaction | WBInteraction000040356 | ||||||||
WBInteraction000044341 | |||||||||
WBInteraction000044345 | |||||||||
WBInteraction000044354 | |||||||||
WBInteraction000044359 | |||||||||
WBInteraction000046099 | |||||||||
WBInteraction000048561 | |||||||||
WBInteraction000240606 | |||||||||
WBInteraction000297044 | |||||||||
Map_info | Positive | Positive_clone | Y48A6C | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | III | 6.07936 | |||||||
Reference | WBPaper00028280 | ||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
Method | Gene |