WormBase Tree Display for Gene: WBGene00012947
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WBGene00012947 | SMap | S_parent | Sequence | Y47H9C | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | Y47H9C.1 | |||||||
Molecular_name | Y47H9C.1 | ||||||||
Y47H9C.1.1 | |||||||||
CE20262 | |||||||||
Other_name | CELE_Y47H9C.1 | Accession_evidence | NDB | BX284601 | |||||
Public_name | Y47H9C.1 | ||||||||
DB_info | Database | AceView | gene | 1M424 | |||||
WormQTL | gene | WBGene00012947 | |||||||
WormFlux | gene | WBGene00012947 | |||||||
NDB | locus_tag | CELE_Y47H9C.1 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00012947|UniProtKB=Q9XWE2 | |||||||
family | PTHR21733 | ||||||||
NCBI | gene | 173061 | |||||||
RefSeq | protein | NM_060605.2 | |||||||
TREEFAM | TREEFAM_ID | TF315857 | |||||||
TrEMBL | UniProtAcc | Q9XWE2 | |||||||
UniProt_GCRP | UniProtAcc | Q9XWE2 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (50) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (44) | |||||||||
Paralog (21) | |||||||||
Structured_description | Automated_description | Enriched in OLL; PVD; head mesodermal cell; intestine; and pharyngeal muscle cell based on microarray; tiling array; and RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by thirty-one chemicals including Heme; hydrogen sulfide; and Nitric Oxide based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: Transmembrane glycoprotein. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y47H9C.1 | |||||||
Corresponding_transcript | Y47H9C.1.1 | ||||||||
Other_sequence | CRC03684_1 | ||||||||
Associated_feature (3) | |||||||||
Experimental_info | RNAi_result | WBRNAi00037204 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00004661 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00056838 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1010684 | ||||||||
Expr1160295 | |||||||||
Expr2007644 | |||||||||
Expr2025883 | |||||||||
Drives_construct | WBCnstr00029778 | ||||||||
Construct_product | WBCnstr00029778 | ||||||||
Microarray_results (14) | |||||||||
Expression_cluster (280) | |||||||||
Interaction (4) | |||||||||
Map_info | Positive | Positive_clone | Y47H9C | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | I | 10.9833 | |||||||
Method | Gene |