WormBase Tree Display for Gene: WBGene00012946
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| WBGene00012946 | SMap | S_parent | Sequence | Y47H9B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y47H9B.2 | |||||||
| Molecular_name | Y47H9B.2 | ||||||||
| Y47H9B.2.1 | |||||||||
| CE34123 | |||||||||
| Other_name | CELE_Y47H9B.2 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | Y47H9B.2 | ||||||||
| DB_info | Database | AceView | gene | 1M339 | |||||
| WormQTL | gene | WBGene00012946 | |||||||
| WormFlux | gene | WBGene00012946 | |||||||
| NDB | locus_tag | CELE_Y47H9B.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012946|UniProtKB=Q9XWZ8 | |||||||
| family | PTHR34005 | ||||||||
| NCBI | gene | 173057 | |||||||
| RefSeq | protein | NM_060592.4 | |||||||
| TREEFAM | TREEFAM_ID | TF317169 | |||||||
| TrEMBL | UniProtAcc | Q9XWZ8 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XWZ8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (87) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00125359 | Caenorhabditis japonica | From_analysis | TreeFam | |||||
| WBGene00056129 | Caenorhabditis remanei | From_analysis | TreeFam | ||||||
| WBGene00069995 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| TreeFam | |||||||||
| WBGene00069994 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| TreeFam | |||||||||
| WBGene00069993 | Caenorhabditis remanei | From_analysis | TreeFam | ||||||
| WBGene00151146 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
| WBGene00034353 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
| WBGene00034356 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
| WBGene00034352 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
| OMA | |||||||||
| chrI_pilon.g2339 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog (15) | |||||||||
| Structured_description | Automated_description | Enriched in NSM; SIB; body wall muscle cell; touch receptor neurons; and in male based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including skn-1; eat-2; and sir-2.1 based on tiling array; microarray; and RNA-seq studies. Is affected by twelve chemicals including methylmercuric chloride; multi-walled carbon nanotube; and D-glucose based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Nematode trypsin-6-like family and Chymotrypsin family Peptidase-S1. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y47H9B.2 | |||||||
| Corresponding_CDS_history | Y47H9B.2:wp101 | ||||||||
| Corresponding_transcript | Y47H9B.2.1 | ||||||||
| Other_sequence | FG647866.1 | ||||||||
| Associated_feature | WBsf656952 | ||||||||
| WBsf656953 | |||||||||
| WBsf985380 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00004660 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00056837 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00037203 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004659 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00056836 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1014485 | ||||||||
| Expr1035741 | |||||||||
| Expr1160294 | |||||||||
| Expr2007643 | |||||||||
| Expr2025881 | |||||||||
| Drives_construct | WBCnstr00029779 | ||||||||
| Construct_product | WBCnstr00029779 | ||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (125) | |||||||||
| Interaction | WBInteraction000135128 | ||||||||
| WBInteraction000281170 | |||||||||
| WBInteraction000328869 | |||||||||
| WBInteraction000410265 | |||||||||
| Map_info | Positive | Positive_clone | Y47H9B | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 9.61169 | |||||||
| Method | Gene |
