WormBase Tree Display for Gene: WBGene00012840
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| WBGene00012840 | SMap | S_parent | Sequence | Y43F8C | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | grsp-1 | Person_evidence | WBPerson168 | |||||
| Sequence_name | Y43F8C.20 | ||||||||
| Molecular_name | Y43F8C.20 | ||||||||
| Y43F8C.20.1 | |||||||||
| CE35086 | |||||||||
| Other_name | CELE_Y43F8C.20 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | grsp-1 | ||||||||
| DB_info | Database | AceView | gene | 5U87 | |||||
| WormQTL | gene | WBGene00012840 | |||||||
| WormFlux | gene | WBGene00012840 | |||||||
| NDB | locus_tag | CELE_Y43F8C.20 | |||||||
| NCBI | gene | 259344 | |||||||
| RefSeq | protein | NM_001029067.4 | |||||||
| TrEMBL | UniProtAcc | Q7YWQ8 | |||||||
| UniProt_GCRP | UniProtAcc | Q7YWQ8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 28 Jul 2005 14:14:25 | WBPerson2970 | Name_change | CGC_name | grsp-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | grsp | ||||||||
| Allele (84) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00028091 | Caenorhabditis briggsae | From_analysis | OMA | |||||
| WBGene00065963 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| WBGene00163758 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
| WBGene00120770 | Caenorhabditis japonica | From_analysis | OMA | ||||||
| chrV_pilon.g17923 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in AFD based on RNA-seq studies. Is affected by several genes including daf-16; daf-2; and glp-1 based on microarray; RNA-seq; and proteomic studies. Is affected by eleven chemicals including D-glucose; bisphenol A; and Psoralens based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y43F8C.20 | |||||||
| Corresponding_transcript | Y43F8C.20.1 | ||||||||
| Other_sequence | MHC06210_1 | ||||||||
| CJC03001_1 | |||||||||
| XIC00467_1 | |||||||||
| XI03592 | |||||||||
| MH01806 | |||||||||
| Associated_feature | WBsf982085 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00019972 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1028870 | ||||||||
| Expr1160003 | |||||||||
| Expr2012278 | |||||||||
| Expr2030514 | |||||||||
| Microarray_results | SMD_Y116F11A.VV | ||||||||
| A_12_P108543 | |||||||||
| GPL14144_Y43F8C.20_320-379_0.884_1_A | |||||||||
| GPL19516_CGZ0046385 | |||||||||
| GPL21109_Y43F8C.20 | |||||||||
| GPL8304_CE_WBGene00012840_A | |||||||||
| GPL8304_CE_WBGene00012840_B | |||||||||
| GPL8673_Y43F8C_20P00006 | |||||||||
| GPL8673_Y43F8C_20P00010 | |||||||||
| GPL8673_Y43F8C_20P00011 | |||||||||
| Expression_cluster (132) | |||||||||
| Interaction | WBInteraction000563911 | ||||||||
| Map_info | Map | V | Position | 22.5108 | Error | 0.026582 | |||
| Positive | Positive_clone | Y43F8C | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00040135 | ||||||||
| WBPaper00063926 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
