WormBase Tree Display for Gene: WBGene00012811
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| WBGene00012811 | SMap | S_parent | Sequence | Y43F8A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | slcr-46.2 | Laboratory_evidence | GNW | |||||
| Sequence_name | Y43F8A.5 | ||||||||
| Molecular_name | Y43F8A.5 | ||||||||
| Y43F8A.5.1 | |||||||||
| CE21884 | |||||||||
| Other_name | CELE_Y43F8A.5 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | slcr-46.2 | ||||||||
| DB_info | Database | AceView | gene | 5T860 | |||||
| WormQTL | gene | WBGene00012811 | |||||||
| WormFlux | gene | WBGene00012811 | |||||||
| NDB | locus_tag | CELE_Y43F8A.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012811|UniProtKB=Q9XWL3 | |||||||
| family | PTHR23507 | ||||||||
| NCBI | gene | 180270 | |||||||
| RefSeq | protein | NM_075372.6 | |||||||
| TrEMBL | UniProtAcc | Q9XWL3 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XWL3 | |||||||
| OMIM | gene | 611672 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 11 Sep 2019 12:48:59 | WBPerson1983 | Name_change | CGC_name | slcr-46.2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | slcr | ||||||||
| Allele (396) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00103639 | ||||||||
| 00103640 | |||||||||
| 00103641 | |||||||||
| 00103642 | |||||||||
| 00103643 | |||||||||
| Ortholog (39) | |||||||||
| Paralog | WBGene00009582 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00016705 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00021159 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable transmembrane transporter activity. Predicted to be involved in transmembrane transport. Predicted to be located in membrane. Human ortholog(s) of this gene implicated in hereditary folate malabsorption. Is an ortholog of human SLC46A1 (solute carrier family 46 member 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0111678 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:30521) | ||||
| Molecular_info | Corresponding_CDS | Y43F8A.5 | |||||||
| Corresponding_transcript | Y43F8A.5.1 | ||||||||
| Other_sequence | JI478799.1 | ||||||||
| JI482552.1 | |||||||||
| Associated_feature | WBsf716613 | ||||||||
| WBsf1003237 | |||||||||
| WBsf1003238 | |||||||||
| WBsf1003239 | |||||||||
| WBsf1021737 | |||||||||
| WBsf1021738 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00019965 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00056502 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00037051 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020548 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00019963 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022442 | ||||||||
| Expr1159968 | |||||||||
| Expr2007495 | |||||||||
| Expr2025731 | |||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (112) | |||||||||
| Interaction | WBInteraction000372905 | ||||||||
| WBInteraction000474915 | |||||||||
| Map_info | Positive | Positive_clone | Y43F8A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 21.5815 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
