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WormBase Tree Display for Gene: WBGene00012727

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Name Class

WBGene00012727SMapS_parentSequenceY39G8B
IdentityVersion1
NameSequence_nameY39G8B.7
Molecular_nameY39G8B.7
Y39G8B.7.1
CE24248
Other_nameCELE_Y39G8B.7Accession_evidenceNDBBX284602
Public_nameY39G8B.7
DB_infoDatabaseAceViewgene2O282
WormQTLgeneWBGene00012727
WormFluxgeneWBGene00012727
NDBlocus_tagCELE_Y39G8B.7
PanthergeneCAEEL|WormBase=WBGene00012727|UniProtKB=Q9U2J2
familyPTHR21724
NCBIgene189765
RefSeqproteinNM_064529.5
TREEFAMTREEFAM_IDTF318899
TrEMBLUniProtAccQ9U2J2
UniProt_GCRPUniProtAccQ9U2J2
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:54WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (17)
Possibly_affected_byWBVar02158568
RNASeq_FPKM (74)
Ortholog (18)
Paralog (61)
Structured_descriptionAutomated_descriptionEnriched in OLL; PVD; intestine; and male-specific anatomical entity based on microarray and tiling array studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray; tiling array; and RNA-seq studies. Is affected by ten chemicals including Heme; Tunicamycin; and TPEN based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: ShK domain-like and ShKT domain.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY39G8B.7
Corresponding_transcriptY39G8B.7.1
Associated_featureWBsf990574
WBsf1013738
WBsf224233
Experimental_infoRNAi_resultWBRNAi00036958Inferred_automaticallyRNAi_primary
WBRNAi00056288Inferred_automaticallyRNAi_primary
WBRNAi00020422Inferred_automaticallyRNAi_primary
WBRNAi00070079Inferred_automaticallyRNAi_primary
Expr_patternExpr1023440
Expr1159772
Expr2025638
Drives_constructWBCnstr00029858
Construct_productWBCnstr00029858
Microarray_results (15)
Expression_cluster (147)
Map_infoPositivePositive_cloneY39G8BInferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII21.9981
ReferenceWBPaper00064543
MethodGene