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WormBase Tree Display for Gene: WBGene00012725

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Name Class

WBGene00012725SMapS_parentSequenceY39G8B
IdentityVersion2
NameCGC_namesre-47Person_evidenceWBPerson522
Sequence_nameY39G8B.4
Molecular_nameY39G8B.4
Y39G8B.4.1
CE38886
Other_nameCELE_Y39G8B.4Accession_evidenceNDBBX284602
Public_namesre-47
DB_infoDatabaseAceViewgene2O272
WormQTLgeneWBGene00012725
WormFluxgeneWBGene00012725
NDBlocus_tagCELE_Y39G8B.4
PanthergeneCAEEL|WormBase=WBGene00012725|UniProtKB=Q9U2J1
familyPTHR47631
NCBIgene189763
RefSeqproteinNM_064527.3
TREEFAMTREEFAM_IDTF316213
TrEMBLUniProtAccQ9U2J1
UniProt_GCRPUniProtAccQ9U2J1
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:54WBPerson1971EventImportedInitial conversion from CDS class of WS125
218 Jan 2005 14:50:06WBPerson2970Name_changeCGC_namesre-47
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsre
Allele (31)
StrainWBStrain00001981
RNASeq_FPKM (74)
GO_annotation00099314
00099315
00119759
00119760
Ortholog (19)
Paralog (45)
Structured_descriptionAutomated_descriptionPredicted to be involved in sensory perception of chemical stimulus. Predicted to be located in membrane. Expressed in head.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY39G8B.4
Corresponding_CDS_historyY39G8B.4:wp139
Y39G8B.4:wp145
Corresponding_transcriptY39G8B.4.1
Associated_featureWBsf666353
Experimental_infoRNAi_resultWBRNAi00056286Inferred_automaticallyRNAi_primary
Expr_patternExpr6959
Expr1020996
Expr1159770
Expr2016299
Expr2034525
Drives_constructWBCnstr00002765
Microarray_results (15)
Expression_cluster (15)
Map_infoMapIIPosition21.8553Error0.058825
PositivePositive_cloneY39G8BInferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene