WormBase Tree Display for Gene: WBGene00012725
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WBGene00012725 | SMap | S_parent | Sequence | Y39G8B | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | sre-47 | Person_evidence | WBPerson522 | |||||
Sequence_name | Y39G8B.4 | ||||||||
Molecular_name | Y39G8B.4 | ||||||||
Y39G8B.4.1 | |||||||||
CE38886 | |||||||||
Other_name | CELE_Y39G8B.4 | Accession_evidence | NDB | BX284602 | |||||
Public_name | sre-47 | ||||||||
DB_info | Database | AceView | gene | 2O272 | |||||
WormQTL | gene | WBGene00012725 | |||||||
WormFlux | gene | WBGene00012725 | |||||||
NDB | locus_tag | CELE_Y39G8B.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00012725|UniProtKB=Q9U2J1 | |||||||
family | PTHR47631 | ||||||||
NCBI | gene | 189763 | |||||||
RefSeq | protein | NM_064527.3 | |||||||
TREEFAM | TREEFAM_ID | TF316213 | |||||||
TrEMBL | UniProtAcc | Q9U2J1 | |||||||
UniProt_GCRP | UniProtAcc | Q9U2J1 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 18 Jan 2005 14:50:06 | WBPerson2970 | Name_change | CGC_name | sre-47 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | sre | ||||||||
Allele (31) | |||||||||
Strain | WBStrain00001981 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00099314 | ||||||||
00099315 | |||||||||
00119759 | |||||||||
00119760 | |||||||||
Ortholog (19) | |||||||||
Paralog (45) | |||||||||
Structured_description | Automated_description | Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in membrane. Expressed in head. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y39G8B.4 | |||||||
Corresponding_CDS_history | Y39G8B.4:wp139 | ||||||||
Y39G8B.4:wp145 | |||||||||
Corresponding_transcript | Y39G8B.4.1 | ||||||||
Associated_feature | WBsf666353 | ||||||||
Experimental_info | RNAi_result | WBRNAi00056286 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr6959 | ||||||||
Expr1020996 | |||||||||
Expr1159770 | |||||||||
Expr2016299 | |||||||||
Expr2034525 | |||||||||
Drives_construct | WBCnstr00002765 | ||||||||
Microarray_results (15) | |||||||||
Expression_cluster (15) | |||||||||
Map_info | Map | II | Position | 21.8553 | Error | 0.058825 | |||
Positive | Positive_clone | Y39G8B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |