WormBase Tree Display for Gene: WBGene00012683
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WBGene00012683 | SMap | S_parent | Sequence | Y39B6A | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | asp-17 | Person_evidence | WBPerson261 | |||
Sequence_name | Y39B6A.24 | ||||||
Molecular_name | Y39B6A.24 | ||||||
Y39B6A.24.1 | |||||||
CE29865 | |||||||
Other_name | CELE_Y39B6A.24 | Accession_evidence | NDB | BX284605 | |||
Public_name | asp-17 | ||||||
DB_info | Database (12) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | asp | ||||||
Allele (50) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (11) | |||||||
Ortholog (55) | |||||||
Paralog (17) | |||||||
Structured_description | Automated_description | Predicted to enable aspartic-type endopeptidase activity. Predicted to be involved in proteolysis. Predicted to be located in lysosome. Is an ortholog of several human genes including CTSE (cathepsin E); PGA3 (pepsinogen A3); and PGA5 (pepsinogen A5). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info (3) | |||||||
Experimental_info | RNAi_result | WBRNAi00070068 | Inferred_automatically | RNAi_primary | |||
WBRNAi00020384 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00076780 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00056178 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr13759 | ||||||
Expr1012892 | |||||||
Expr1159682 | |||||||
Expr2009463 | |||||||
Expr2027700 | |||||||
Microarray_results (16) | |||||||
Expression_cluster (291) | |||||||
Interaction | WBInteraction000524304 | ||||||
Map_info | Map | V | Position | 18.4979 | |||
Positive | Positive_clone | Y39B6A | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00030811 | ||||||
WBPaper00038491 | |||||||
WBPaper00055090 | |||||||
WBPaper00059347 | |||||||
WBPaper00062388 | |||||||
WBPaper00065012 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |