WormBase Tree Display for Gene: WBGene00012640
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| WBGene00012640 | SMap | S_parent | Sequence | Y38H8A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y38H8A.7 | |||||||
| Molecular_name | Y38H8A.7 | ||||||||
| Y38H8A.7.1 | |||||||||
| CE35657 | |||||||||
| Other_name | CELE_Y38H8A.7 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | Y38H8A.7 | ||||||||
| DB_info | Database | AceView | gene | 4O219 | |||||
| WormFlux | gene | WBGene00012640 | |||||||
| NDB | locus_tag | CELE_Y38H8A.7 | |||||||
| NCBI | gene | 3565211 | |||||||
| RefSeq | protein | NM_001383237.1 | |||||||
| TREEFAM | TREEFAM_ID | TF323049 | |||||||
| TrEMBL | UniProtAcc | Q7K7Q1 | |||||||
| UniProt_GCRP | UniProtAcc | Q7K7Q1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (36) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | chrIV_pilon.g12309 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Paralog | WBGene00009951 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00021971 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Structured_description | Automated_description | Enriched in germline precursor cell based on RNA-seq studies. Is affected by several genes including daf-16; skn-1; and daf-12 based on tiling array; microarray; and RNA-seq studies. Is affected by six chemicals including metformin; Sirolimus; and Rifampin based on RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y38H8A.7 | |||||||
| Corresponding_CDS_history | Y38H8A.7:wp191 | ||||||||
| Y38H8A.7:wp231 | |||||||||
| Corresponding_transcript | Y38H8A.7.1 | ||||||||
| Other_sequence | Hbac_isotig06846 | ||||||||
| EX539314.1 | |||||||||
| MH09650 | |||||||||
| MJ03389 | |||||||||
| ACC36874_1 | |||||||||
| MHC02208_1 | |||||||||
| ES410577.1 | |||||||||
| MIC01944_1 | |||||||||
| MH00835 | |||||||||
| Associated_feature | WBsf998407 | ||||||||
| WBsf998408 | |||||||||
| WBsf998409 | |||||||||
| WBsf1018532 | |||||||||
| WBsf1018533 | |||||||||
| WBsf1018534 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00024222 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00024149 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00023349 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020465 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004151 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00057722 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00023862 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021157 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1159612 | ||||||||
| Expr2007337 | |||||||||
| Expr2025572 | |||||||||
| Microarray_results | A_12_P142480 | ||||||||
| GPL19516_CGZ0044716 | |||||||||
| GPL21109_Y38H8A.7 | |||||||||
| GPL8304_CE_WBGene00012640_A | |||||||||
| GPL8304_CE_WBGene00012640_B | |||||||||
| GPL8673_Y38H8A_7P00029 | |||||||||
| GPL8673_Y38H8A_7P00032 | |||||||||
| GPL8673_Y38H8A_7P00034 | |||||||||
| Expression_cluster (64) | |||||||||
| Map_info | Positive | Positive_clone | Y38H8A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 9.27169 | |||||||
| Method | Gene |
