WormBase Tree Display for Gene: WBGene00012636
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WBGene00012636 | SMap | S_parent | Sequence | Y38H8A | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | Y38H8A.2 | |||||||
Molecular_name | Y38H8A.2a | ||||||||
Y38H8A.2a.1 | |||||||||
CE18364 | |||||||||
Y38H8A.2b | |||||||||
CE39825 | |||||||||
Y38H8A.2b.1 | |||||||||
Other_name | CELE_Y38H8A.2 | Accession_evidence | NDB | BX284604 | |||||
Public_name | Y38H8A.2 | ||||||||
DB_info | Database | AceView | gene | 4O241 | |||||
WormQTL | gene | WBGene00012636 | |||||||
WormFlux | gene | WBGene00012636 | |||||||
NDB | locus_tag | CELE_Y38H8A.2 | |||||||
NCBI | gene | 189703 | |||||||
RefSeq | protein | NM_001047557.2 | |||||||
NM_001047558.3 | |||||||||
TREEFAM | TREEFAM_ID | TF315859 | |||||||
TrEMBL | UniProtAcc | O62427 | |||||||
Q2HQM3 | |||||||||
UniProt_GCRP | UniProtAcc | O62427 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (38) | |||||||||
Strain | WBStrain00036297 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00037893 | ||||||||
Ortholog | WBGene00062388 | Caenorhabditis remanei | From_analysis | OMA | |||||
TreeFam | |||||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00159550 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
TreeFam | |||||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00155061 | Caenorhabditis brenneri | From_analysis | WormBase-Compara | ||||||
GCK72_002272 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
Sp34_10348100 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||||
chrIV_pilon.g12315 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Paralog | WBGene00017354 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Structured_description | Automated_description | Predicted to enable metal ion binding activity. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y38H8A.2a | |||||||
Y38H8A.2b | |||||||||
Corresponding_transcript | Y38H8A.2a.1 | ||||||||
Y38H8A.2b.1 | |||||||||
Other_sequence | CRC04757_1 | ||||||||
Experimental_info | RNAi_result | WBRNAi00094787 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00076774 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00036876 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00056085 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1021440 | ||||||||
Expr1159608 | |||||||||
Expr2007334 | |||||||||
Expr2025569 | |||||||||
Microarray_results (25) | |||||||||
Expression_cluster (111) | |||||||||
SAGE_tag | SAGE:ttggttttca | Strand | Antisense | ||||||
SAGE:gataggcttgtttccag | Strand | Antisense | |||||||
SAGE:ggaggtaggcgcggttg | Strand | Antisense | |||||||
Interaction (13) | |||||||||
Map_info | Positive | Positive_clone | Y38H8A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | IV | 9.28674 | |||||||
Reference | WBPaper00027315 | ||||||||
Method | Gene |