WormBase Tree Display for Gene: WBGene00012622
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| WBGene00012622 | SMap | S_parent | Sequence | Y38H6C | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y38H6C.9 | |||||||
| Molecular_name | Y38H6C.9a | ||||||||
| Y38H6C.9a.1 | |||||||||
| CE43867 | |||||||||
| Y38H6C.9b | |||||||||
| Y38H6C.9c | |||||||||
| Y38H6C.9d | |||||||||
| Other_name | CELE_Y38H6C.9 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | Y38H6C.9 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (95) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00057801 | Caenorhabditis remanei | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00155764 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||||
| WormBase-Compara | |||||||||
| WBGene00149321 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||||
| WormBase-Compara | |||||||||
| WBGene00144343 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||||
| WormBase-Compara | |||||||||
| Csp11.Scaffold630.g21620 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||||
| Csp5_scaffold_04735.g33619 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||||
| FL83_12957 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||||
| GCK72_019547 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
| chrV_pilon.g18103 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog (213) | |||||||||
| Structured_description | Automated_description | Enriched in neurons and somatic gonad precursor based on tiling array and RNA-seq studies. Is affected by several genes including daf-2; hsf-1; and rrf-3 based on microarray and RNA-seq studies. Is affected by eleven chemicals including methylmercuric chloride; multi-walled carbon nanotube; and Sodium Chloride based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Domain of unknown function DUF38/FTH, Caenorhabditis species and FTH domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y38H6C.9a | |||||||
| Corresponding_CDS_history | Y38H6C.9:wp204 | ||||||||
| Corresponding_transcript | Y38H6C.9b | ||||||||
| Y38H6C.9c | |||||||||
| Y38H6C.9d | |||||||||
| Y38H6C.9a.1 | |||||||||
| Associated_feature | WBsf653617 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00036874 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00020332 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00056081 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1027969 | ||||||||
| Expr1159605 | |||||||||
| Expr2007332 | |||||||||
| Expr2025566 | |||||||||
| Drives_construct | WBCnstr00029879 | ||||||||
| Construct_product | WBCnstr00029879 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (145) | |||||||||
| Interaction | WBInteraction000145701 | ||||||||
| WBInteraction000246717 | |||||||||
| WBInteraction000250402 | |||||||||
| WBInteraction000264292 | |||||||||
| WBInteraction000265605 | |||||||||
| WBInteraction000288722 | |||||||||
| WBInteraction000321620 | |||||||||
| Map_info | Positive | Positive_clone | Y38H6C | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 25.0071 | |||||||
| Method | Gene |
