WormBase Tree Display for Gene: WBGene00012564

WBGene00012564 SMap: S_parent: Sequence: Y37H2A
  Identity: Version: 2
    Name: CGC_name: fbxa-107 Person_evidence: WBPerson655
      Sequence_name: Y37H2A.4
      Molecular_name: Y37H2A.4
        Y37H2A.4.1
        CE24210
      Other_name: CELE_Y37H2A.4 Accession_evidence: NDB BX284605
      Public_name: fbxa-107
    DB_info: Database: AceView gene 5S601
        WormQTL gene WBGene00012564
        WormFlux gene WBGene00012564
        NDB locus_tag CELE_Y37H2A.4
        Panther gene CAEEL|WormBase=WBGene00012564|UniProtKB=Q9U2P1
          family PTHR23015
        NCBI gene 189628
        RefSeq protein NM_075135.4
        TREEFAM TREEFAM_ID TF322006
        TrEMBL UniProtAcc Q9U2P1
        UniProt_GCRP UniProtAcc Q9U2P1
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:53 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 12 Dec 2005 15:18:56 WBPerson2970 Name_change: CGC_name: fbxa-107
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxa
    Allele (34)
    RNASeq_FPKM (74)
    Contained_in_operon: CEOP5577
    Ortholog (19)
    Paralog (225)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in ADEL; ADER; germ line; germline precursor cell; and head mesodermal cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; glp-1; and age-1 based on microarray; tiling array; and RNA-seq studies. Is affected by nine chemicals including manganese chloride; mianserin; and Zidovudine based on RNA-seq studies. Is predicted to encode a protein with the following domains: F-box-like domain superfamily; FTH domain; F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; and F-box A protein FB224. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y37H2A.4
    Corresponding_transcript: Y37H2A.4.1
  Experimental_info: RNAi_result: WBRNAi00036813 Inferred_automatically: RNAi_primary
      WBRNAi00055952 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1019169
      Expr1035564
      Expr1159475
      Expr2011454
      Expr2029692
    Microarray_results (14)
    Expression_cluster (149)
    Interaction: WBInteraction000544170
  Map_info: Map: V Position: 14.1695 Error: 0.029365
    Positive: Positive_clone: Y37H2A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00012854
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene