WormBase Tree Display for Gene: WBGene00012500

WBGene00012500 SMap: S_parent: Sequence: Y26D4A
  Identity: Version: 2
    Name: CGC_name: hpo-2 Paper_evidence: WBPaper00038231
          Person_evidence: WBPerson26
      Sequence_name: Y26D4A.2
      Molecular_name: Y26D4A.2
        Y26D4A.2.1
        CE36230
      Other_name: CELE_Y26D4A.2 Accession_evidence: NDB BX284601
      Public_name: hpo-2
    DB_info: Database: AceView gene 1N661
        WormQTL gene WBGene00012500
        WormFlux gene WBGene00012500
        NDB locus_tag CELE_Y26D4A.2
        Panther gene CAEEL|WormBase=WBGene00012500|UniProtKB=Q9U2Q4
          family PTHR47629
        NCBI gene 173178
        RefSeq protein NM_060884.4
        TREEFAM TREEFAM_ID TF317657
        TrEMBL UniProtAcc Q9U2Q4
        UniProt_GCRP UniProtAcc Q9U2Q4
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:53 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 26 Apr 2011 13:31:47 WBPerson2970 Name_change: CGC_name: hpo-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: hpo
    Allele (130)
    RNASeq_FPKM (74)
    Ortholog (34)
    Paralog (116)
    Structured_description: Automated_description: Enriched in RID; body wall musculature; male-specific anatomical entity; and in male based on RNA-seq and microarray studies. Is affected by several genes including daf-16; hsf-1; and rrf-3 based on microarray; tiling array; and RNA-seq studies. Is affected by ten chemicals including multi-walled carbon nanotube; Alovudine; and stavudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; PAN-like domain; and PAN-3 domain. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y26D4A.2
    Corresponding_CDS_history: Y26D4A.2:wp114
    Corresponding_transcript: Y26D4A.2.1
    Other_sequence: CR03180
      CRC03961_2
      CR01710
    Associated_feature: WBsf985769
      WBsf985770
      WBsf985771
      WBsf1011012
      WBsf218679
  Experimental_info: RNAi_result: WBRNAi00055746 Inferred_automatically: RNAi_primary
      WBRNAi00036741 Inferred_automatically: RNAi_primary
      WBRNAi00004568 Inferred_automatically: RNAi_primary
      WBRNAi00088688 Inferred_automatically: RNAi_primary
      WBRNAi00000506 Inferred_automatically: RNAi_primary
      WBRNAi00088581 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1021715
      Expr1159267
      Expr2012569
      Expr2030806
    Drives_construct: WBCnstr00029941
    Construct_product: WBCnstr00029941
    Microarray_results (14)
    Expression_cluster (99)
    Interaction (18)
  Map_info: Map: I Position: 17.1758 Error: 0.010338
    Positive: Positive_clone: Y26D4A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene