WormBase Tree Display for Gene: WBGene00012488
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| WBGene00012488 | SMap | S_parent | Sequence | Y18D10A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | clec-105 | Person_evidence | WBPerson2531 | |||||
| Sequence_name | Y18D10A.24 | ||||||||
| Molecular_name | Y18D10A.24 | ||||||||
| Y18D10A.24.1 | |||||||||
| CE53907 | |||||||||
| Other_name | CELE_Y18D10A.24 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | clec-105 | ||||||||
| DB_info | Database | AceView | gene | 1N456 | |||||
| WormQTL | gene | WBGene00012488 | |||||||
| WormFlux | gene | WBGene00012488 | |||||||
| NDB | locus_tag | CELE_Y18D10A.24 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012488|UniProtKB=Q7YWS2 | |||||||
| family | PTHR23124 | ||||||||
| NCBI | gene | 3564776 | |||||||
| RefSeq | protein | NM_001377665.1 | |||||||
| TREEFAM | TREEFAM_ID | TF315870 | |||||||
| TrEMBL | UniProtAcc | Q7YWS2 | |||||||
| UniProt_GCRP | UniProtAcc | Q7YWS2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 09 Oct 2007 15:40:27 | WBPerson2970 | Name_change | CGC_name | clec-105 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clec | ||||||||
| Allele (22) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (43) | |||||||||
| Paralog (126) | |||||||||
| Structured_description | Automated_description | Enriched in NSM based on tiling array studies. Is affected by several genes including hpl-2; jmjd-3.1; and jmjd-1.2 based on tiling array and RNA-seq studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; C-type lectin-like; and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y18D10A.24 | |||||||
| Corresponding_CDS_history | Y18D10A.24:wp274 | ||||||||
| Corresponding_transcript | Y18D10A.24.1 | ||||||||
| Experimental_info | Expr_pattern | Expr1027344 | |||||||
| Expr1159124 | |||||||||
| Expr2028293 | |||||||||
| Microarray_results | A_12_P116479 | ||||||||
| Aff_Y18D10A.L | |||||||||
| GPL14144_Y18D10A.24_472-531_0.893_5_A | |||||||||
| GPL19516_CGZ0043402 | |||||||||
| GPL21109_Y18D10A.24 | |||||||||
| GPL8304_CE_WBGene00012488_A | |||||||||
| GPL8673_Y18D10A_24P00156 | |||||||||
| GPL8673_Y18D10A_24P00423 | |||||||||
| GPL8673_Y18D10A_24P00487 | |||||||||
| Expression_cluster (21) | |||||||||
| Interaction (62) | |||||||||
| Map_info | Map | I | Position | 14.158 | Error | 0.003028 | |||
| Positive | Positive_clone | Y18D10A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
