WormBase Tree Display for Gene: WBGene00012383
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| WBGene00012383 | SMap | S_parent | Sequence | Y5F2A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ttr-17 | |||||||
| Sequence_name | Y5F2A.2 | ||||||||
| Molecular_name | Y5F2A.2 | ||||||||
| Y5F2A.2.1 | |||||||||
| CE19023 | |||||||||
| Other_name | CELE_Y5F2A.2 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | ttr-17 | ||||||||
| DB_info | Database | AceView | gene | 4L830 | |||||
| WormQTL | gene | WBGene00012383 | |||||||
| WormFlux | gene | WBGene00012383 | |||||||
| NDB | locus_tag | CELE_Y5F2A.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012383|UniProtKB=Q9XWL1 | |||||||
| family | PTHR21700 | ||||||||
| NCBI | gene | 178003 | |||||||
| RefSeq | protein | NM_069660.8 | |||||||
| TREEFAM | TREEFAM_ID | TF315773 | |||||||
| TrEMBL | UniProtAcc | Q9XWL1 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XWL1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 20 Sep 2007 11:48:01 | WBPerson2970 | Name_change | CGC_name | ttr-17 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ttr | ||||||||
| Allele (16) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00103638 | ||||||||
| 00119536 | |||||||||
| Ortholog (44) | |||||||||
| Paralog (62) | |||||||||
| Structured_description | Automated_description | Predicted to be located in cell surface and extracellular region. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y5F2A.2 | |||||||
| Corresponding_transcript | Y5F2A.2.1 | ||||||||
| Other_sequence (114) | |||||||||
| Associated_feature | WBsf652182 | ||||||||
| WBsf652183 | |||||||||
| WBsf652184 | |||||||||
| WBsf668289 | |||||||||
| WBsf997758 | |||||||||
| WBsf1018169 | |||||||||
| WBsf230813 | |||||||||
| WBsf230814 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00057790 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00037643 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021183 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1023387 | ||||||||
| Expr1035486 | |||||||||
| Expr1161220 | |||||||||
| Expr2017581 | |||||||||
| Expr2035721 | |||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (249) | |||||||||
| Interaction (67) | |||||||||
| Map_info | Map | IV | Position | 4.82388 | Error | 0.00071 | |||
| Positive | Positive_clone | Y5F2A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038444 | ||||||||
| WBPaper00040135 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
