WormBase Tree Display for Gene: WBGene00012382
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WBGene00012382 | SMap | S_parent | Sequence | Y5F2A | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | ttr-16 | |||||
Sequence_name | Y5F2A.1 | ||||||
Molecular_name | Y5F2A.1 | ||||||
Y5F2A.1.1 | |||||||
CE19022 | |||||||
Other_name | CELE_Y5F2A.1 | Accession_evidence | NDB | BX284604 | |||
Public_name | ttr-16 | ||||||
DB_info | Database | AceView | gene | 4L828 | |||
WormQTL | gene | WBGene00012382 | |||||
WormFlux | gene | WBGene00012382 | |||||
NDB | locus_tag | CELE_Y5F2A.1 | |||||
Panther | gene | CAEEL|WormBase=WBGene00012382|UniProtKB=P55955 | |||||
family | PTHR21700 | ||||||
NCBI | gene | 178002 | |||||
RefSeq | protein | NM_001383201.2 | |||||
SwissProt | UniProtAcc | P55955 | |||||
TREEFAM | TREEFAM_ID | TF315773 | |||||
UniProt_GCRP | UniProtAcc | P55955 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | ttr | ||||||
Allele (12) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (3) | |||||||
Ortholog (26) | |||||||
Paralog (62) | |||||||
Structured_description | Automated_description | Predicted to be located in cell surface and extracellular region. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y5F2A.1 | |||||
Corresponding_transcript | Y5F2A.1.1 | ||||||
Other_sequence (66) | |||||||
Associated_feature | WBsf652180 | ||||||
WBsf652181 | |||||||
WBsf668288 | |||||||
WBsf230810 | |||||||
WBsf230811 | |||||||
WBsf230812 | |||||||
Experimental_info | RNAi_result | WBRNAi00021182 | Inferred_automatically | RNAi_primary | |||
WBRNAi00057789 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00037642 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00001663 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1013713 | ||||||
Expr1035485 | |||||||
Expr1161219 | |||||||
Expr2017580 | |||||||
Expr2035720 | |||||||
Microarray_results (18) | |||||||
Expression_cluster (175) | |||||||
Interaction (86) | |||||||
Map_info | Map | IV | Position | 4.82258 | |||
Positive | Positive_clone | Y5F2A | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00033099 | ||||||
WBPaper00063976 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |