WormBase Tree Display for Gene: WBGene00012365
expand all nodes | collapse all nodes | view schema
WBGene00012365 | SMap | S_parent | Sequence | W09G3 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | W09G3.1 | |||||||
Molecular_name | W09G3.1a | ||||||||
W09G3.1a.1 | |||||||||
CE32509 | |||||||||
W09G3.1b | |||||||||
CE40147 | |||||||||
W09G3.1b.1 | |||||||||
W09G3.1b.2 | |||||||||
Other_name | CELE_W09G3.1 | Accession_evidence | NDB | BX284601 | |||||
Public_name | W09G3.1 | ||||||||
DB_info | Database | AceView | gene | 1O420 | |||||
WormQTL | gene | WBGene00012365 | |||||||
WormFlux | gene | WBGene00012365 | |||||||
NDB | locus_tag | CELE_W09G3.1 | |||||||
NCBI | gene | 173250 | |||||||
RefSeq | protein | NM_001392967.1 | |||||||
NM_061017.5 | |||||||||
TrEMBL | UniProtAcc | Q1ZXR8 | |||||||
Q9U327 | |||||||||
UniProt_GCRP | UniProtAcc | Q9U327 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (64) | |||||||||
RNASeq_FPKM (74) | |||||||||
Contained_in_operon | CEOP1724 | ||||||||
Ortholog (23) | |||||||||
Structured_description | Automated_description | Enriched in several structures, including ABalpapppa; germ line; head mesodermal cell; rectal epithelial cell; and rectum based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including gld-2; sma-2; and smg-2 based on microarray and RNA-seq studies. Is affected by five chemicals including rotenone; Rifampin; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Kelch motif; Kelch repeat type 1; and Kelch-type beta propeller. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | W09G3.1a | |||||||
W09G3.1b | |||||||||
Corresponding_CDS_history | W09G3.1:wp60 | ||||||||
Corresponding_transcript | W09G3.1a.1 | ||||||||
W09G3.1b.1 | |||||||||
W09G3.1b.2 | |||||||||
Associated_feature | WBsf665084 | ||||||||
WBsf985954 | |||||||||
WBsf985955 | |||||||||
WBsf1011121 | |||||||||
WBsf220549 | |||||||||
Experimental_info | RNAi_result | WBRNAi00024208 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00023853 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00004461 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00024140 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00023340 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00056496 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00055063 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00006253 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1025791 | ||||||||
Expr1035479 | |||||||||
Expr1158600 | |||||||||
Expr2006896 | |||||||||
Expr2025123 | |||||||||
Microarray_results (27) | |||||||||
Expression_cluster (45) | |||||||||
Interaction (26) | |||||||||
Map_info | Positive | Positive_clone | W09G3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | I | 21.9921 | |||||||
Method | Gene |