WormBase Tree Display for Gene: WBGene00012322
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| WBGene00012322 | SMap | S_parent | Sequence | CHROMOSOME_II | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | W07A12.4 | |||||||
| Molecular_name (12) | |||||||||
| Other_name | CELE_W07A12.4 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | W07A12.4 | ||||||||
| DB_info | Database | AceView | gene | 2J439 | |||||
| WormQTL | gene | WBGene00012322 | |||||||
| WormFlux | gene | WBGene00012322 | |||||||
| NDB | locus_tag | CELE_W07A12.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012322|UniProtKB=A0A2C9C3D9 | |||||||
| family | PTHR24410 | ||||||||
| NCBI | gene | 174454 | |||||||
| RefSeq | protein | NM_001356884.3 | |||||||
| NM_001356882.5 | |||||||||
| NM_001381555.1 | |||||||||
| NM_063550.6 | |||||||||
| TrEMBL | UniProtAcc | A0A2C9C389 | |||||||
| G5EEX6 | |||||||||
| A0A2C9C3D9 | |||||||||
| A0A2C9C2J8 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A2C9C3D9 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 21 Sep 2017 13:41:06 | WBPerson1983 | Event | Acquires_merge | WBGene00012422 | ||||
| Acquires_merge | WBGene00012422 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (87) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (48) | |||||||||
| Paralog (11) | |||||||||
| Structured_description | Automated_description | Enriched in PLM; SAA; muscle cell; and tail hypodermis based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; rrf-3; and eat-2 based on RNA-seq and microarray studies. Is affected by twelve chemicals including levamisole; Psoralens; and allantoin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: BTB And C-terminal Kelch; SKP1/BTB/POZ domain superfamily; BTB/POZ domain; and BTB/Kelch-associated. Is an ortholog of human BTBD17 (BTB domain containing 17). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W07A12.4a | |||||||
| W07A12.4b | |||||||||
| W07A12.4c | |||||||||
| W07A12.4d | |||||||||
| Corresponding_CDS_history | W07A12.4:wp106 | ||||||||
| W07A12.4:wp120 | |||||||||
| W07A12.4:wp136 | |||||||||
| Corresponding_transcript | W07A12.4a.1 | ||||||||
| W07A12.4b.1 | |||||||||
| W07A12.4c.1 | |||||||||
| W07A12.4d.1 | |||||||||
| Other_sequence (23) | |||||||||
| Associated_feature | WBsf644549 | ||||||||
| WBsf988961 | |||||||||
| WBsf988962 | |||||||||
| WBsf988963 | |||||||||
| WBsf988964 | |||||||||
| WBsf988965 | |||||||||
| WBsf1012817 | |||||||||
| WBsf1012818 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00037936 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00058697 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00019684 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021548 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00036352 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00054925 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1010412 | ||||||||
| Expr1021398 | |||||||||
| Expr1158465 | |||||||||
| Expr1162116 | |||||||||
| Expr2006837 | |||||||||
| Expr2025062 | |||||||||
| Drives_construct | WBCnstr00029962 | ||||||||
| WBCnstr00030002 | |||||||||
| Construct_product | WBCnstr00029962 | ||||||||
| WBCnstr00030002 | |||||||||
| Microarray_results (36) | |||||||||
| Expression_cluster (142) | |||||||||
| Interaction (11) | |||||||||
| Map_info | Positive | Positive_clone | W07A12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 1.05037 | |||||||
| Reference | WBPaper00033099 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
