WormBase Tree Display for Gene: WBGene00012272

WBGene00012272 SMap: S_parent: Sequence: CHROMOSOME_III
  Identity: Version: 3
    Name: CGC_name: dhc-4 Person_evidence: WBPerson260
      Sequence_name: W05B2.4
      Molecular_name: W05B2.4
        W05B2.4.1
        CE51991
      Other_name: CELE_W05B2.4 Accession_evidence: NDB BX284603
      Public_name: dhc-4
    DB_info: Database: AceView gene 3M81
            3M67
        WormQTL gene WBGene00012272
        WormFlux gene WBGene00012272
        NDB locus_tag CELE_W05B2.4
        Panther gene CAEEL|WormBase=WBGene00012272|UniProtKB=Q9XVG4
          family PTHR46454
        NCBI gene 189209
        RefSeq protein NM_001351931.2
        TREEFAM TREEFAM_ID TF316862
        TrEMBL UniProtAcc Q9XVG4
        UniProt_GCRP UniProtAcc Q9XVG4
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:53 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 17 Feb 2012 16:57:01 WBPerson2970 Name_change: CGC_name: dhc-4
        3 28 Apr 2017 01:35:57 WBPerson1983 Event: Acquires_merge: WBGene00012273
      Acquires_merge: WBGene00012273
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: dhc
    Allele (331)
    RNASeq_FPKM (74)
    Ortholog (26)
    Paralog: WBGene00000485 Caenorhabditis elegans From_analysis: Panther
      WBGene00000962 Caenorhabditis elegans From_analysis: Panther
      WBGene00007154 Caenorhabditis elegans From_analysis: Panther
    Structured_description: Automated_description: Enriched in several structures, including ABalaapppa; ABalapaapa; ciliated neurons; hyp3; and ventral nerve cord based on tiling array; single-cell RNA-seq; and RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on tiling array; microarray; and RNA-seq studies. Is affected by thirteen chemicals including manganese chloride; multi-walled carbon nanotube; and D-glucose based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Dynein heavy chain, domain 2, N-terminal; Dynein heavy chain, N-terminal region 2; P-loop containing nucleoside triphosphate hydrolase; and Dynein heavy chain, linker. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: W05B2.4
    Corresponding_CDS_history: W05B2.4:wp200
      W05B2.4:wp259
    Corresponding_transcript: W05B2.4.1
    Other_sequence: JI211144.1
      MH09763
    Associated_feature (15)
  Experimental_info: RNAi_result (12)
    Expr_pattern: Expr6837
      Expr1012172
      Expr1012735
      Expr1035433
      Expr1035434
      Expr1158353
      Expr1158356
      Expr2010873
      Expr2029112
    Drives_construct: WBCnstr00003071
      WBCnstr00030033
      WBCnstr00030034
    Construct_product: WBCnstr00030033
      WBCnstr00030034
    Microarray_results (56)
    Expression_cluster (203)
    Interaction (51)
  Map_info: Map: III Position: 5.78167
    Positive: Positive_clone: W05B2 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00029395
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene