WormBase Tree Display for Gene: WBGene00012233
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| WBGene00012233 | SMap | S_parent | Sequence | W04A4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | clpr-1 | |||||||
| Sequence_name | W04A4.4 | ||||||||
| Molecular_name | W04A4.4a | ||||||||
| W04A4.4a.1 | |||||||||
| CE42935 | |||||||||
| W04A4.4b | |||||||||
| CE36213 | |||||||||
| W04A4.4b.1 | |||||||||
| Other_name | CELE_W04A4.4 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | clpr-1 | ||||||||
| DB_info | Database | AceView | gene | 1O266 | |||||
| WormQTL | gene | WBGene00012233 | |||||||
| WormFlux | gene | WBGene00012233 | |||||||
| NDB | locus_tag | CELE_W04A4.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012233|UniProtKB=O18165 | |||||||
| family | PTHR10183 | ||||||||
| NCBI | gene | 189180 | |||||||
| RefSeq | protein | NM_001404215.1 | |||||||
| NM_060996.3 | |||||||||
| TrEMBL | UniProtAcc | O18165 | |||||||
| A0A8S4QGE5 | |||||||||
| UniProt_GCRP | UniProtAcc | O18165 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 19 Mar 2018 11:13:03 | WBPerson1983 | Name_change | CGC_name | clpr-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clpr | ||||||||
| Allele (32) | |||||||||
| Strain | WBStrain00032657 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00119390 | ||||||||
| 00119391 | |||||||||
| Ortholog (26) | |||||||||
| Paralog (13) | |||||||||
| Structured_description | Automated_description | Predicted to enable calcium-dependent cysteine-type endopeptidase activity. Predicted to be involved in proteolysis. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W04A4.4a | |||||||
| W04A4.4b | |||||||||
| Corresponding_CDS_history | W04A4.4:wp114 | ||||||||
| W04A4.4:wp193 | |||||||||
| Corresponding_transcript | W04A4.4a.1 | ||||||||
| W04A4.4b.1 | |||||||||
| Associated_feature | WBsf665073 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00054741 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00004410 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00036258 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1017023 | ||||||||
| Expr1158278 | |||||||||
| Expr2006752 | |||||||||
| Expr2024973 | |||||||||
| Drives_construct | WBCnstr00030056 | ||||||||
| Construct_product | WBCnstr00030056 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (35) | |||||||||
| Interaction (235) | |||||||||
| Map_info | Map | I | Position | 21.6381 | |||||
| Positive | Positive_clone | W04A4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00055090 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
