WormBase Tree Display for Gene: WBGene00012216
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| WBGene00012216 | SMap | S_parent | Sequence | W02D9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | dpsm-1 | Paper_evidence | WBPaper00062579 | |||||
| Person_evidence | WBPerson8413 | ||||||||
| Sequence_name | W02D9.10 | ||||||||
| Molecular_name | W02D9.10 | ||||||||
| W02D9.10.1 | |||||||||
| CE14472 | |||||||||
| Other_name | CELE_W02D9.10 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | dpsm-1 | ||||||||
| DB_info | Database | AceView | gene | 1N143 | |||||
| WormQTL | gene | WBGene00012216 | |||||||
| WormFlux | gene | WBGene00012216 | |||||||
| NDB | locus_tag | CELE_W02D9.10 | |||||||
| NCBI | gene | 173125 | |||||||
| RefSeq | protein | NM_060779.6 | |||||||
| TREEFAM | TREEFAM_ID | TF318688 | |||||||
| TrEMBL | UniProtAcc | Q9XVG7 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XVG7 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 17 Jun 2022 20:36:35 | WBPerson21950 | Name_change | CGC_name | dpsm-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dpsm | ||||||||
| Allele (20) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (22) | |||||||||
| Paralog | WBGene00009293 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00010223 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalapppaa; arcade cell; head mesodermal cell; intestine; and neurons based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and tiling array studies. Is affected by nineteen chemicals including Lithium Chloride; rotenone; and D-glucose based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W02D9.10 | |||||||
| Corresponding_transcript | W02D9.10.1 | ||||||||
| Other_sequence | CR11205 | ||||||||
| CR11149 | |||||||||
| CRC11130_1 | |||||||||
| CR11148 | |||||||||
| Associated_feature (17) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00073309 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00036196 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00115896 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004379 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00054607 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011703 | ||||||||
| Expr1035407 | |||||||||
| Expr1158151 | |||||||||
| Expr2006698 | |||||||||
| Expr2024916 | |||||||||
| Drives_construct | WBCnstr00030062 | ||||||||
| Construct_product | WBCnstr00030062 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (251) | |||||||||
| Interaction (54) | |||||||||
| Map_info | Positive | Positive_clone | W02D9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 13.5071 | |||||||
| Reference | WBPaper00060275 | ||||||||
| WBPaper00062579 | |||||||||
| WBPaper00065331 | |||||||||
| Method | Gene |
