WormBase Tree Display for Gene: WBGene00012195
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| WBGene00012195 | SMap | S_parent | Sequence | B0019 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | bath-34 | Person_evidence | WBPerson655 | |||||
| Sequence_name | W02A11.5 | ||||||||
| Molecular_name | W02A11.5 | ||||||||
| W02A11.5.1 | |||||||||
| CE18992 | |||||||||
| Other_name | CELE_W02A11.5 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | bath-34 | ||||||||
| DB_info | Database | AceView | gene | 1N341 | |||||
| WormQTL | gene | WBGene00012195 | |||||||
| NDB | locus_tag | CELE_W02A11.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012195|UniProtKB=Q9XUM6 | |||||||
| family | PTHR22743 | ||||||||
| NCBI | gene | 24104971 | |||||||
| RefSeq | protein | NM_001306227.3 | |||||||
| SwissProt | UniProtAcc | Q9XUM6 | |||||||
| TREEFAM | TREEFAM_ID | TF315997 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XUM6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 22 Aug 2005 16:08:42 | WBPerson2970 | Name_change | CGC_name | bath-34 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | bath | ||||||||
| Allele (52) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP1901 | ||||||||
| Ortholog (15) | |||||||||
| Paralog (81) | |||||||||
| Structured_description | Automated_description | Enriched in AVK; germ line; and germline precursor cell based on RNA-seq studies. Is affected by several genes including skn-1; hsf-1; and sir-2.1 based on microarray and RNA-seq studies. Is affected by eleven chemicals including D-glucose; stavudine; and Zidovudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: MATH/TRAF domain; SKP1/BTB/POZ domain superfamily; and BTB/POZ domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W02A11.5 | |||||||
| Corresponding_transcript | W02A11.5.1 | ||||||||
| Associated_feature | WBsf656981 | ||||||||
| WBsf985681 | |||||||||
| WBsf985682 | |||||||||
| WBsf1010959 | |||||||||
| WBsf1010960 | |||||||||
| WBsf1010961 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00036160 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00054541 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004366 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1018159 | ||||||||
| Expr1158087 | |||||||||
| Expr2009550 | |||||||||
| Expr2027787 | |||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (66) | |||||||||
| SAGE_tag | SAGE:tttccaagatgtttctc | Strand | Sense | ||||||
| Unambiguously_mapped | |||||||||
| SAGE:tgttcgatcaatttctg | Strand | Antisense | |||||||
| SAGE:gcgaaggaattaaccgg | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:tttccaagat | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| Interaction | WBInteraction000236219 | ||||||||
| WBInteraction000553910 | |||||||||
| WBInteraction000567909 | |||||||||
| Map_info | Map | I | Position | 13.9812 | Error | 0.002527 | |||
| Positive | Positive_clone | W02A11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
