WormBase Tree Display for Gene: WBGene00012144
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| WBGene00012144 | SMap | S_parent | Sequence | CHROMOSOME_V | ||
|---|---|---|---|---|---|---|
| Identity (6) | ||||||
| Gene_info | Biotype | SO:0001217 | ||||
| Gene_class | lgmn | |||||
| Allele (39) | ||||||
| RNASeq_FPKM (74) | ||||||
| GO_annotation (15) | ||||||
| Ortholog (37) | ||||||
| Paralog | WBGene00011482 | Caenorhabditis elegans | From_analysis | Panther | ||
| WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable cysteine-type endopeptidase activity. Involved in PERK-mediated unfolded protein response. Predicted to be located in vacuole. Is an ortholog of human LGMN (legumain). | Paper_evidence | WBPaper00065943 | ||
| Curator_confirmed | WBPerson324 | |||||
| WBPerson37462 | ||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||
| Molecular_info | Corresponding_CDS | T28H10.3 | ||||
| Corresponding_transcript | T28H10.3.1 | |||||
| Other_sequence (139) | ||||||
| Associated_feature | WBsf647381 | |||||
| WBsf661908 | ||||||
| WBsf232663 | ||||||
| Experimental_info | RNAi_result | WBRNAi00076725 | Inferred_automatically | RNAi_primary | ||
| WBRNAi00054448 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00089172 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00001579 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00036107 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00019417 | Inferred_automatically | RNAi_primary | ||||
| Expr_pattern | Expr10444 | |||||
| Expr10445 | ||||||
| Expr1010916 | ||||||
| Expr1035372 | ||||||
| Expr1157992 | ||||||
| Expr2006638 | ||||||
| Expr2024855 | ||||||
| Drives_construct | WBCnstr00015333 | |||||
| WBCnstr00030108 | ||||||
| Construct_product (2) | ||||||
| Microarray_results (23) | ||||||
| Expression_cluster (345) | ||||||
| Interaction (162) | ||||||
| Map_info | Map | V | Position | 4.43767 | ||
| Positive | Positive_clone | T28H10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
| Pseudo_map_position | ||||||
| Reference | WBPaper00038491 | |||||
| WBPaper00055090 | ||||||
| WBPaper00059755 | ||||||
| WBPaper00062690 | ||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
| Method | Gene |
