WormBase Tree Display for Gene: WBGene00012139
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| WBGene00012139 | SMap | S_parent | Sequence | T28F4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | T28F4.4 | |||||||
| Molecular_name | T28F4.4a | ||||||||
| T28F4.4a.1 | |||||||||
| CE06526 | |||||||||
| T28F4.4b | |||||||||
| CE51940 | |||||||||
| T28F4.4a.2 | |||||||||
| T28F4.4a.3 | |||||||||
| T28F4.4a.4 | |||||||||
| T28F4.4b.1 | |||||||||
| Other_name | CELE_T28F4.4 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | T28F4.4 | ||||||||
| DB_info | Database | AceView | gene | 1I62 | |||||
| WormQTL | gene | WBGene00012139 | |||||||
| WormFlux | gene | WBGene00012139 | |||||||
| NDB | locus_tag | CELE_T28F4.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012139|UniProtKB=A0A1T5HUH9 | |||||||
| family | PTHR23312 | ||||||||
| NCBI | gene | 172502 | |||||||
| RefSeq | protein | NM_059700.8 | |||||||
| NM_001380711.2 | |||||||||
| TrEMBL | UniProtAcc | A0A1T5HUH9 | |||||||
| Q22853 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A1T5HUH9 | |||||||
| OMIM | gene | 615549 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 03 Mar 2017 00:18:26 | WBPerson1983 | Event | Acquires_merge | WBGene00012141 | ||||
| Acquires_merge | WBGene00012141 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (92) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00002666 | ||||||||
| 00002667 | |||||||||
| Ortholog (32) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in anatomical structure morphogenesis. Predicted to be located in cytosol. Human ortholog(s) of this gene implicated in ACTH-independent macronodular adrenal hyperplasia 2. Is an ortholog of human ARMC5 (armadillo repeat containing 5). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0111624 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:25781) | ||||
| Molecular_info | Corresponding_CDS | T28F4.4a | |||||||
| T28F4.4b | |||||||||
| Corresponding_transcript | T28F4.4a.1 | ||||||||
| T28F4.4a.2 | |||||||||
| T28F4.4a.3 | |||||||||
| T28F4.4a.4 | |||||||||
| T28F4.4b.1 | |||||||||
| Other_sequence | CJC08489_1 | ||||||||
| Oden_isotig18639 | |||||||||
| Associated_feature (14) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00004349 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00054445 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00054443 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00054444 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004347 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00036104 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011085 | ||||||||
| Expr1017222 | |||||||||
| Expr1035368 | |||||||||
| Expr1035370 | |||||||||
| Expr1157987 | |||||||||
| Expr1157989 | |||||||||
| Expr2006633 | |||||||||
| Expr2024850 | |||||||||
| Drives_construct | WBCnstr00030110 | ||||||||
| WBCnstr00030112 | |||||||||
| Construct_product | WBCnstr00030110 | ||||||||
| WBCnstr00030112 | |||||||||
| Microarray_results (37) | |||||||||
| Expression_cluster (184) | |||||||||
| Interaction (12) | |||||||||
| Map_info | Positive | Positive_clone | T28F4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 2.09677 | |||||||
| Method | Gene |
