WormBase Tree Display for Gene: WBGene00012116

WBGene00012116 SMap: S_parent: Sequence: T28B8
  Identity: Version: 2
    Name: CGC_name: del-4 Person_evidence: WBPerson145
      Sequence_name: T28B8.5
      Molecular_name: T28B8.5
        T28B8.5.1
        CE32505
      Other_name: CELE_T28B8.5 Accession_evidence: NDB BX284601
      Public_name: del-4
    DB_info: Database: AceView gene 1I714
        WormQTL gene WBGene00012116
        WormFlux gene WBGene00012116
        NDB locus_tag CELE_T28B8.5
        Panther gene CAEEL|WormBase=WBGene00012116|UniProtKB=P91835
          family PTHR11690
        NCBI gene 189033
        RefSeq protein NM_059829.7
        TrEMBL UniProtAcc P91835
        UniProt_GCRP UniProtAcc P91835
        OMIM gene 600761
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:53 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 08 Aug 2007 10:25:59 WBPerson2970 Name_change: CGC_name: del-4
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: del
    Allele (45)
    Strain: WBStrain00031770
    RNASeq_FPKM (74)
    GO_annotation (11)
    Ortholog (40)
    Paralog (30)
    Structured_description: Automated_description: Predicted to enable ligand-gated sodium channel activity. Predicted to be involved in sodium ion transmembrane transport. Predicted to be located in membrane. Expressed in ganglia and neurons. Human ortholog(s) of this gene implicated in Liddle syndrome; bronchiectasis 3; and pseudohypoaldosteronism. Is an ortholog of human SCNN1G (sodium channel epithelial 1 subunit gamma). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0050477 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:10602)
      DOID:4479 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:10602)
      DOID:0080528 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:10602)
  Molecular_info: Corresponding_CDS: T28B8.5
    Corresponding_CDS_history: T28B8.5:wp90
    Corresponding_transcript: T28B8.5.1
    Other_sequence: Oden_isotig27148
      Oden_isotig22643
    Associated_feature: WBsf664516
      WBsf984353
      WBsf984354
      WBsf984355
      WBsf1010190
      WBsf1010191
      WBsf1010192
      WBsf219872
  Experimental_info: RNAi_result: WBRNAi00036072 Inferred_automatically: RNAi_primary
      WBRNAi00054386 Inferred_automatically: RNAi_primary
      WBRNAi00092989 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr7929
      Expr14459
      Expr1025550
      Expr1157933
      Expr2010850
      Expr2029088
    Drives_construct: WBCnstr00013004
      WBCnstr00030127
      WBCnstr00040888
    Construct_product: WBCnstr00030127
    Microarray_results (18)
    Expression_cluster (88)
    Interaction (19)
  Map_info: Map: I Position: 2.58173 Error: 0.008487
    Positive: Positive_clone: T28B8 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (14)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene