WormBase Tree Display for Gene: WBGene00012050
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WBGene00012050 | SMap | S_parent | Sequence | T26E4 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | nhr-223 | Person_evidence | WBPerson600 | |||||
Sequence_name | T26E4.8 | ||||||||
Molecular_name | T26E4.8 | ||||||||
T26E4.8.1 | |||||||||
CE52996 | |||||||||
Other_name | CELE_T26E4.8 | Accession_evidence | NDB | BX284605 | |||||
Public_name | nhr-223 | ||||||||
DB_info | Database | AceView | gene | 5Q275 | |||||
WormQTL | gene | WBGene00012050 | |||||||
WormFlux | gene | WBGene00012050 | |||||||
NDB | locus_tag | CELE_T26E4.8 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00012050|UniProtKB=O45842 | |||||||
family | PTHR45886 | ||||||||
NCBI | gene | 188934 | |||||||
RefSeq | protein | NM_001373169.1 | |||||||
TREEFAM | TREEFAM_ID | TF319181 | |||||||
TrEMBL | UniProtAcc | O45842 | |||||||
UniProt_GCRP | UniProtAcc | O45842 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 22 Jul 2005 10:29:12 | WBPerson2970 | Name_change | CGC_name | nhr-223 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | nhr | ||||||||
Allele (76) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00033597 | ||||||||
00033598 | |||||||||
00033599 | |||||||||
00113999 | |||||||||
00114000 | |||||||||
00114001 | |||||||||
00114002 | |||||||||
Ortholog (12) | |||||||||
Paralog (218) | |||||||||
Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | T26E4.8 | |||||||
Corresponding_CDS_history | T26E4.8:wp252 | ||||||||
T26E4.8:wp270 | |||||||||
Corresponding_transcript | T26E4.8.1 | ||||||||
Associated_feature | WBsf978793 | ||||||||
Transcription_factor | WBTranscriptionFactor000921 | ||||||||
Experimental_info | RNAi_result | WBRNAi00115842 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00019268 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00054218 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1011518 | ||||||||
Expr1157762 | |||||||||
Drives_construct | WBCnstr00030172 | ||||||||
Construct_product | WBCnstr00030172 | ||||||||
Microarray_results (16) | |||||||||
Expression_cluster (12) | |||||||||
Interaction (36) | |||||||||
Map_info | Map | V | Position | 8.93186 | Error | 0.008226 | |||
Positive | Positive_clone | T26E4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 5343 | |||||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |