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WormBase Tree Display for Gene: WBGene00012022

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Name Class

WBGene00012022SMapS_parentSequenceT25E12
IdentityVersion2
NameCGC_nameclec-39Person_evidenceWBPerson655
Sequence_nameT25E12.7
Molecular_nameT25E12.7
T25E12.7.1
CE43655
Other_nameCELE_T25E12.7Accession_evidenceNDBBX284605
Public_nameclec-39
DB_infoDatabaseAceViewgene5R221
WormQTLgeneWBGene00012022
WormFluxgeneWBGene00012022
NDBlocus_tagCELE_T25E12.7
PanthergeneCAEEL|WormBase=WBGene00012022|UniProtKB=O45821
familyPTHR22991
NCBIgene188899
RefSeqproteinNM_074835.4
TREEFAMTREEFAM_IDTF351663
TrEMBLUniProtAccO45821
UniProt_GCRPUniProtAccO45821
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:53WBPerson1971EventImportedInitial conversion from CDS class of WS125
229 Apr 2005 13:53:46WBPerson2970Name_changeCGC_nameclec-39
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classclec
Allele (139)
StrainWBStrain00032458
RNASeq_FPKM (74)
GO_annotation00035359
Ortholog (36)
Paralog (53)
Structured_descriptionAutomated_descriptionPredicted to be located in membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDST25E12.7
Corresponding_CDS_historyT25E12.7:wp143
T25E12.7:wp201
Corresponding_transcriptT25E12.7.1
Experimental_infoRNAi_resultWBRNAi00054138Inferred_automaticallyRNAi_primary
WBRNAi00019218Inferred_automaticallyRNAi_primary
Expr_patternExpr1025070
Expr1157685
Expr2010171
Expr2028413
Drives_constructWBCnstr00030194
Construct_productWBCnstr00030194
Microarray_results (15)
Expression_cluster (33)
Interaction (17)
Map_infoMapVPosition11.1508Error0.00222
PositivePositive_cloneT25E12Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00038491
WBPaper00044859
WBPaper00055090
WBPaper00058228
WBPaper00060000
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene