WormBase Tree Display for Gene: WBGene00011645
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| WBGene00011645 | SMap | S_parent | Sequence | T09B9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T09B9.4 | |||||||
| Molecular_name | T09B9.4 | ||||||||
| T09B9.4.1 | |||||||||
| CE01652 | |||||||||
| Other_name | CELE_T09B9.4 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | T09B9.4 | ||||||||
| DB_info | Database | AceView | gene | XK390 | |||||
| WormQTL | gene | WBGene00011645 | |||||||
| WormFlux | gene | WBGene00011645 | |||||||
| NDB | locus_tag | CELE_T09B9.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011645|UniProtKB=Q09350 | |||||||
| family | PTHR15276 | ||||||||
| NCBI | gene | 181190 | |||||||
| RefSeq | protein | NM_077239.6 | |||||||
| SwissProt | UniProtAcc | Q09350 | |||||||
| TREEFAM | TREEFAM_ID | TF321211 | |||||||
| UniProt_GCRP | UniProtAcc | Q09350 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (52) | |||||||||
| Strain | WBStrain00031951 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (32) | |||||||||
| Structured_description | Concise_description | T09B9.4 is orthologous to the human gene PUTATIVE CYTOSKELETAL PROTEIN (D10S170; OMIM:601985), which when mutated leads to disease. | Curator_confirmed | WBPerson1823 | |||||
| WBPerson567 | |||||||||
| Date_last_updated | 06 Aug 2004 00:00:00 | ||||||||
| Automated_description | Enriched in several structures, including carbon dioxide sensory neurons; cephalic sheath cell; germ line; germline precursor cell; and male distal tip cell based on RNA-seq and microarray studies. Is affected by several genes including glp-1; dpy-10; and daf-12 based on microarray; RNA-seq; tiling array; and proteomic studies. Is affected by four chemicals including paraquat; resveratrol; and Hydrolyzable Tannins based on RNA-seq and microarray studies. Human CCDC6 enables identical protein binding activity. Is predicted to encode a protein with the following domains: Protein of unknown function DUF2046; Phosphorylation site; and Uncharacterized conserved protein H4 (DUF2046). Is an ortholog of human CCDC6 (coiled-coil domain containing 6). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T09B9.4 | |||||||
| Corresponding_transcript | T09B9.4.1 | ||||||||
| Other_sequence (12) | |||||||||
| Associated_feature | WBsf654279 | ||||||||
| WBsf655696 | |||||||||
| WBsf1006527 | |||||||||
| WBsf1006528 | |||||||||
| WBsf1006529 | |||||||||
| WBsf1023624 | |||||||||
| WBsf1023625 | |||||||||
| WBsf237790 | |||||||||
| WBsf237791 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00052942 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00018493 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1028363 | ||||||||
| Expr1035130 | |||||||||
| Expr1156543 | |||||||||
| Expr2006037 | |||||||||
| Expr2024252 | |||||||||
| Drives_construct | WBCnstr00030504 | ||||||||
| Construct_product | WBCnstr00030504 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (136) | |||||||||
| Interaction (17) | |||||||||
| Map_info | Positive | Positive_clone | T09B9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | 1.52929 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00060275 | |||||||||
| Method | Gene |
