WormBase Tree Display for Gene: WBGene00011578
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| WBGene00011578 | SMap | S_parent | Sequence | CHROMOSOME_II | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | npr-20 | Person_evidence | WBPerson42 | |||||
| WBPerson3043 | |||||||||
| Sequence_name | T07D4.1 | ||||||||
| Molecular_name | T07D4.1 | ||||||||
| T07D4.1.1 | |||||||||
| CE46449 | |||||||||
| Other_name | CELE_T07D4.1 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | npr-20 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 21 May 2010 15:53:40 | WBPerson2970 | Name_change | CGC_name | npr-20 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | npr | ||||||||
| Allele (62) | |||||||||
| Strain | WBStrain00032642 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00018714 | ||||||||
| 00018715 | |||||||||
| 00018716 | |||||||||
| 00018717 | |||||||||
| 00018718 | |||||||||
| 00118810 | |||||||||
| 00118811 | |||||||||
| 00118812 | |||||||||
| Ortholog (97) | |||||||||
| Paralog | WBGene00016747 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00020727 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00019616 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00013187 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Human ortholog(s) of this gene implicated in several diseases, including Alzheimer's disease; autoimmune disease (multiple); carcinoma (multiple); and lung disease (multiple). Is an ortholog of several human genes including CCR1 (C-C motif chemokine receptor 1); CCR3 (C-C motif chemokine receptor 3); and CXCR5 (C-X-C motif chemokine receptor 5). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model (124) | ||||||||
| Molecular_info | Corresponding_CDS | T07D4.1 | |||||||
| Corresponding_CDS_history | T07D4.1:wp120 | ||||||||
| T07D4.1:wp227 | |||||||||
| Corresponding_transcript | T07D4.1.1 | ||||||||
| Other_sequence (13) | |||||||||
| Associated_feature | WBsf665856 | ||||||||
| WBsf988841 | |||||||||
| WBsf988842 | |||||||||
| WBsf988843 | |||||||||
| WBsf1012758 | |||||||||
| WBsf1012759 | |||||||||
| WBsf1012760 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00080072 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00018366 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00080156 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00052757 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021515 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026294 | ||||||||
| Expr1156366 | |||||||||
| Expr2014406 | |||||||||
| Expr2032647 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (113) | |||||||||
| Interaction | WBInteraction000165021 | ||||||||
| WBInteraction000305466 | |||||||||
| WBInteraction000552398 | |||||||||
| WBInteraction000552716 | |||||||||
| WBInteraction000553439 | |||||||||
| WBInteraction000553668 | |||||||||
| WBInteraction000553809 | |||||||||
| Map_info | Map | II | Position | 0.912321 | Error | 0.001969 | |||
| Positive | Positive_clone | T07D4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00043908 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
