WormBase Tree Display for Gene: WBGene00011565
expand all nodes | collapse all nodes | view schema
| WBGene00011565 | SMap | S_parent | Sequence | T07C5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nhr-272 | Person_evidence | WBPerson600 | |||||
| Sequence_name | T07C5.2 | ||||||||
| Molecular_name | T07C5.2 | ||||||||
| T07C5.2.1 | |||||||||
| CE06380 | |||||||||
| Other_name | CELE_T07C5.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | nhr-272 | ||||||||
| DB_info | Database | AceView | gene | XN320 | |||||
| WormQTL | gene | WBGene00011565 | |||||||
| WormFlux | gene | WBGene00011565 | |||||||
| NDB | locus_tag | CELE_T07C5.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011565|UniProtKB=Q22298 | |||||||
| family | PTHR45886 | ||||||||
| NCBI | gene | 188209 | |||||||
| RefSeq | protein | NM_077721.5 | |||||||
| TREEFAM | TREEFAM_ID | TF315373 | |||||||
| TrEMBL | UniProtAcc | Q22298 | |||||||
| UniProt_GCRP | UniProtAcc | Q22298 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 22 Jul 2005 10:29:12 | WBPerson2970 | Name_change | CGC_name | nhr-272 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Allele (38) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00074834 | ||||||||
| 00074835 | |||||||||
| 00074836 | |||||||||
| 00118792 | |||||||||
| 00118793 | |||||||||
| 00118794 | |||||||||
| 00118795 | |||||||||
| Ortholog (19) | |||||||||
| Paralog (222) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T07C5.2 | |||||||
| Corresponding_transcript | T07C5.2.1 | ||||||||
| Associated_feature | WBsf978710 | ||||||||
| Transcription_factor | WBTranscriptionFactor000912 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00052737 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00018350 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011132 | ||||||||
| Expr1156344 | |||||||||
| Expr2014162 | |||||||||
| Expr2032406 | |||||||||
| Drives_construct | WBCnstr00030555 | ||||||||
| Construct_product | WBCnstr00030555 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (29) | |||||||||
| Interaction (29) | |||||||||
| Map_info | Map | X | Position | 8.04159 | Error | 0.025938 | |||
| Positive | Positive_clone | T07C5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5420 | |||||||
| 5425 | |||||||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
