WormBase Tree Display for Gene: WBGene00011562
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| WBGene00011562 | SMap | S_parent | Sequence | CHROMOSOME_III | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | sas-7 | Paper_evidence | WBPaper00050643 | |||||
| Person_evidence | WBPerson75 | ||||||||
| Sequence_name | T07C4.10 | ||||||||
| Molecular_name | T07C4.10 | ||||||||
| T07C4.10.1 | |||||||||
| CE38103 | |||||||||
| Other_name | CELE_T07C4.10 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | sas-7 | ||||||||
| DB_info | Database | AceView | gene | 3L413 | |||||
| WormQTL | gene | WBGene00011562 | |||||||
| WormFlux | gene | WBGene00011562 | |||||||
| NDB | locus_tag | CELE_T07C4.10 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011562|UniProtKB=G5EBL8 | |||||||
| family | PTHR34491 | ||||||||
| NCBI | gene | 176445 | |||||||
| RefSeq | protein | NM_001027583.5 | |||||||
| SwissProt | UniProtAcc | G5EBL8 | |||||||
| TREEFAM | TREEFAM_ID | TF343786 | |||||||
| UniProt_GCRP | UniProtAcc | G5EBL8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 03 Feb 2005 09:37:48 | WBPerson1983 | Event | Split_into | WBGene00044098 | ||||
| 3 | 10 Feb 2017 12:23:30 | WBPerson2970 | Name_change | CGC_name | sas-7 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sas | ||||||||
| Allele (66) | |||||||||
| Strain | WBStrain00007394 | ||||||||
| WBStrain00007422 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00009811 | ||||||||
| 00009812 | |||||||||
| 00009813 | |||||||||
| 00009814 | |||||||||
| Ortholog (18) | |||||||||
| Structured_description | Concise_description | sas-7 encodes a predicted coiled-coil protein and centriole component that interacts with SPD-2 and regulates its centriolar localization; sas-7 is required for the centriole duplication preferentially in the daughter centriole, for the formation of paddlewheel structure in the centriole, and for the spindle assembly; microarray and RNA sequencing studies indicate that T07C4.10 is regulated by lin-35, lin-15B, nhr-114, tatn-1, cco-1, ifg-1, sir-2.1, fbf-1, lin-54, cdk-4, cyd-1, cye-1, cdk-2, tbx-2, and nuo-6; RNA sequencing studies indicate that T07C4.10 is enriched in the germ line and in the NSM neurons. | Paper_evidence | WBPaper00050643 | |||||
| WBPaper00045521 | |||||||||
| Person_evidence | WBPerson75 | ||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 18 Apr 2017 00:00:00 | ||||||||
| Automated_description | Predicted to be located in centriole and cytoplasm. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T07C4.10 | |||||||
| Corresponding_CDS_history | T07C4.10a:wp139 | ||||||||
| T07C4.10b:wp139 | |||||||||
| Corresponding_transcript | T07C4.10.1 | ||||||||
| Other_sequence | CRC07505_1 | ||||||||
| CR03387 | |||||||||
| Associated_feature | WBsf645556 | ||||||||
| WBsf659492 | |||||||||
| WBsf993973 | |||||||||
| WBsf225705 | |||||||||
| WBsf225706 | |||||||||
| WBsf225707 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00052722 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00052723 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006038 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00022440 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr13211 | ||||||||
| Expr16266 | |||||||||
| Expr1029149 | |||||||||
| Expr1035097 | |||||||||
| Expr1156332 | |||||||||
| Expr2015604 | |||||||||
| Expr2033839 | |||||||||
| Drives_construct | WBCnstr00030558 | ||||||||
| Construct_product | WBCnstr00030558 | ||||||||
| WBCnstr00038602 | |||||||||
| WBCnstr00038603 | |||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (136) | |||||||||
| Interaction (24) | |||||||||
| Map_info | Map | III | Position | 2.31508 | |||||
| Positive | Positive_clone | T07C4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00047930 | ||||||||
| WBPaper00050643 | |||||||||
| WBPaper00050883 | |||||||||
| WBPaper00057730 | |||||||||
| WBPaper00061962 | |||||||||
| WBPaper00063055 | |||||||||
| WBPaper00064496 | |||||||||
| WBPaper00065159 | |||||||||
| WBPaper00065544 | |||||||||
| WBPaper00065626 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
