WormBase Tree Display for Gene: WBGene00011542
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| WBGene00011542 | SMap | S_parent | Sequence | CHROMOSOME_V | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxa-104 | Person_evidence | WBPerson655 | |||||
| Sequence_name | T06E6.13 | ||||||||
| Molecular_name | T06E6.13 | ||||||||
| T06E6.13.1 | |||||||||
| CE42992 | |||||||||
| Other_name | CELE_T06E6.13 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | fbxa-104 | ||||||||
| DB_info | Database | AceView | gene | 5P900 | |||||
| WormQTL | gene | WBGene00011542 | |||||||
| WormFlux | gene | WBGene00011542 | |||||||
| NDB | locus_tag | CELE_T06E6.13 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011542|UniProtKB=G5EEP4 | |||||||
| family | PTHR23015 | ||||||||
| NCBI | gene | 188192 | |||||||
| RefSeq | protein | NM_074436.3 | |||||||
| TREEFAM | TREEFAM_ID | TF322006 | |||||||
| TrEMBL | UniProtAcc | G5EEP4 | |||||||
| UniProt_GCRP | UniProtAcc | G5EEP4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 12 Dec 2005 15:18:56 | WBPerson2970 | Name_change | CGC_name | fbxa-104 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxa | ||||||||
| Allele (61) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (15) | |||||||||
| Paralog (223) | |||||||||
| Structured_description | Automated_description | Enriched in intestine based on RNA-seq studies. Is affected by several genes including eat-2; sir-2.1; and csr-1 based on microarray; RNA-seq; and proteomic studies. Is affected by four chemicals including stearic acid; sucrose; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box-like domain superfamily; FTH domain; F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; and F-box A protein FB224. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T06E6.13 | |||||||
| Corresponding_CDS_history | T06E6.13:wp194 | ||||||||
| Corresponding_transcript | T06E6.13.1 | ||||||||
| Associated_feature | WBsf653449 | ||||||||
| WBsf653450 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00035275 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00018308 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00052665 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020316 | ||||||||
| Expr1156270 | |||||||||
| Expr2011451 | |||||||||
| Expr2029689 | |||||||||
| Drives_construct | WBCnstr00030574 | ||||||||
| Construct_product | WBCnstr00030574 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (71) | |||||||||
| Interaction (15) | |||||||||
| Map_info | Map | V | Position | 8.0782 | Error | 0.003487 | |||
| Positive | Positive_clone | T06E6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
