WormBase Tree Display for Gene: WBGene00011513
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| WBGene00011513 | SMap | S_parent | Sequence | T06C12 | |||
|---|---|---|---|---|---|---|---|
| Identity (6) | |||||||
| Gene_info | Biotype | SO:0001217 | |||||
| Gene_class | fbxa | ||||||
| Allele (30) | |||||||
| RNASeq_FPKM (74) | |||||||
| Contained_in_operon | CEOP5535 | ||||||
| Ortholog (34) | |||||||
| Paralog (222) | |||||||
| Structured_description | Automated_description | Enriched in several structures, including I5 neuron; cholinergic neurons; germ line; germline precursor cell; and head mesodermal cell based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-2; skn-1; and glp-1 based on microarray and RNA-seq studies. Is affected by fourteen chemicals including methylmercuric chloride; manganese chloride; and stavudine based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Mos1 transposase, HTH domain; FTH domain; HTH domain in Mos1 transposase; Domain of unknown function DUF38/FTH, Caenorhabditis species; and F-box A protein FB224. | Paper_evidence | WBPaper00065943 | |||
| Curator_confirmed | WBPerson324 | ||||||
| WBPerson37462 | |||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
| Molecular_info | Corresponding_CDS | T06C12.4 | |||||
| Corresponding_transcript | T06C12.4.1 | ||||||
| Other_sequence | CBC01996_1 | ||||||
| CBC02683_1 | |||||||
| Associated_feature | WBsf662137 | ||||||
| WBsf233052 | |||||||
| Experimental_info | RNAi_result | WBRNAi00052628 | Inferred_automatically | RNAi_primary | |||
| WBRNAi00062357 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00035257 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00018281 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1026732 | ||||||
| Expr1156233 | |||||||
| Expr2011511 | |||||||
| Expr2029748 | |||||||
| Drives_construct | WBCnstr00030597 | ||||||
| Construct_product | WBCnstr00030597 | ||||||
| Microarray_results (15) | |||||||
| Expression_cluster (105) | |||||||
| Interaction (58) | |||||||
| Map_info | Map | V | Position | 9.02871 | Error | 0.002877 | |
| Positive | Positive_clone | T06C12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
| Pseudo_map_position | |||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
| Method | Gene |
