WormBase Tree Display for Gene: WBGene00011462
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WBGene00011462 | SMap | S_parent | Sequence | T05A10 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 4 | |||||||
Name (5) | |||||||||
DB_info | Database | AceView | gene | XL408 | |||||
WormQTL | gene | WBGene00011462 | |||||||
WormFlux | gene | WBGene00011462 | |||||||
NDB | locus_tag | CELE_T05A10.5 | |||||||
Panther | gene | CAEEL|WormBase=T05A10.5b|UniProtKB=A0A0K3AST9 | |||||||
family | PTHR10334 | ||||||||
NCBI | gene | 181273 | |||||||
RefSeq | protein | NM_001313449.4 | |||||||
NM_077401.7 | |||||||||
NM_001313448.4 | |||||||||
TrEMBL | UniProtAcc | P90958 | |||||||
A0A0K3AST9 | |||||||||
A0A0K3AWG2 | |||||||||
UniProt_GCRP | UniProtAcc | A0A0K3AST9 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 07 Nov 2007 11:51:23 | WBPerson2970 | Name_change | CGC_name | scl-22 | ||||
3 | 08 Jul 2011 16:11:30 | WBPerson2970 | Event | Acquires_merge | WBGene00011461 | ||||
4 | 28 Nov 2014 08:07:55 | WBPerson2970 | Name_change | CGC_name | vap-2 | ||||
Other_name | scl-22 | ||||||||
Acquires_merge | WBGene00011461 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | vap | ||||||||
Allele (43) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00001105 | ||||||||
00001106 | |||||||||
Ortholog (31) | |||||||||
Paralog (27) | |||||||||
Structured_description | Automated_description | Predicted to be located in extracellular space. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed (2) | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | T05A10.5a | |||||||
T05A10.5b | |||||||||
T05A10.5c | |||||||||
Corresponding_CDS_history | T05A10.5:wp209 | ||||||||
Corresponding_transcript | T05A10.5a.1 | ||||||||
T05A10.5b.1 | |||||||||
T05A10.5c.1 | |||||||||
Other_sequence | Oden_isotig19726 | ||||||||
AF001100.1 | |||||||||
Dviv_isotig27766 | |||||||||
Associated_feature | WBsf1006821 | ||||||||
WBsf1006822 | |||||||||
WBsf1023772 | |||||||||
WBsf237892 | |||||||||
Experimental_info | RNAi_result | WBRNAi00052435 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00070874 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00035163 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00070875 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00018173 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00018172 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00052434 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00035162 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00071630 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00071841 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1029167 | ||||||||
Expr1156055 | |||||||||
Expr2017961 | |||||||||
Expr2036097 | |||||||||
Drives_construct | WBCnstr00030637 | ||||||||
Construct_product | WBCnstr00030637 | ||||||||
Microarray_results (34) | |||||||||
Expression_cluster (219) | |||||||||
Interaction (99) | |||||||||
Map_info | Map | X | Position | 2.53228 | |||||
Positive | Positive_clone | T05A10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00033099 | ||||||||
WBPaper00033394 | |||||||||
WBPaper00038491 | |||||||||
WBPaper00048405 | |||||||||
WBPaper00049847 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00065331 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |